CB304679
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24 Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = -3 Query: 241 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 516 AITCGQV ++ PC+ + R GG P CC+GVRSL AA TT DR+ ACNCLK A R G+NA AA +P +CGVS+PY IS + DCSRV Sbjct: 25 AITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24 Identity = 53/92 (57.61%), Postives = 66/92 (71.74%), Query Frame = -3 Query: 241 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 516 AI+CGQV +++PC+++ R GG P CC+GVRSLN AA TT DR+ ACNCLK S G+NA AA +P +CGVSIPY ISP+ DCS V Sbjct: 26 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24 Identity = 53/92 (57.61%), Postives = 66/92 (71.74%), Query Frame = -3 Query: 241 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 516 AI+CGQV +++PC+++ R GG P CC+GVRSLN AA TT DR+ ACNCLK S G+NA AA +P +CGVSIPY ISP+ DCS V Sbjct: 27 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.751e-24 Identity = 50/93 (53.76%), Postives = 68/93 (73.12%), Query Frame = -3 Query: 238 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 516 AI+CGQV+ +L+PCI++ R G PP CC+GV+ L GAA++T D+QAAC C+K A G+NA AAG+P CGVS+PY IS + DCS++R Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSA---AGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.287e-24 Identity = 53/96 (55.21%), Postives = 63/96 (65.62%), Query Frame = -3 Query: 241 PXTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 528 P AITCG V LAPCI +L+ G P CC G++SLN AA + DR+ AC CLK A S GIN AA LPRQCGVS+PY ISPNT+C+ + Sbjct: 22 PLAEAITCGLVASKLAPCIGYLQ-GAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.287e-24 Identity = 50/93 (53.76%), Postives = 68/93 (73.12%), Query Frame = -3 Query: 238 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 516 AI+CGQV+ +L+PCI++ R G PP CC+GV+ L GAA++T D+QAAC C+K A G+NA AAG+P CGVS+PY IS + DCS++R Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSA---AGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.287e-24 Identity = 50/93 (53.76%), Postives = 68/93 (73.12%), Query Frame = -3 Query: 238 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 516 AI+CGQV+ +L+PCI++ R G PP CC+GV+ L GAA++T D+QAAC C+K A G+NA AAG+P CGVS+PY IS + DCS++R Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSA---AGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 3.900e-24 Identity = 51/96 (53.12%), Postives = 64/96 (66.67%), Query Frame = -3 Query: 241 PXTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 528 P +A+TCGQV LAPCI + P CC+GVR+LN AA TT DRQ C CLKQ + G+ ++ AG+P +CGV+IPY ISP+TDCSRV Sbjct: 23 PAASAVTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.900e-24 Identity = 53/97 (54.64%), Postives = 66/97 (68.04%), Query Frame = -3 Query: 238 PXTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 528 P +++CG+VT LAPC+ +L GR P CC GV+ L GAA+T DR+ AC CLK A S GI+ AAGLP CGV+IPYKISP+TDCS V+ Sbjct: 20 PHAESLSCGEVTSGLAPCLPYLE--GRGPLGGCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.653e-24 Identity = 52/97 (53.61%), Postives = 67/97 (69.07%), Query Frame = -3 Query: 238 PXTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 528 P A++CGQV LAPC+ +L+ GR P CC GV+ L GAA++ DR+ AC CLK A + GI+ AAGLP CGV+IPYKISP+TDCS+V+ Sbjct: 20 PHAEALSCGQVQSGLAPCLPYLQ--GRGPLGSCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114 The following BLAST results are available for this feature:
BLAST of CB304679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304679 ID=CB304679; Name=CB304679; organism=Citrus sinensis; type=EST; length=608bpback to top |