CB304679
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.632e-23 Identity = 52/93 (55.91%), Postives = 64/93 (68.82%), Query Frame = -3 Query: 238 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 516 A++CG V+G+LA CI +L G P CC+GV SLN ARTTPDRQ AC CL A + P IN AAGLP+ CGV+IPYKIS T+C+ V+ Sbjct: 26 ALSCGTVSGNLAACIGYLTQNGPVPTA-CCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 117
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.632e-23 Identity = 52/93 (55.91%), Postives = 65/93 (69.89%), Query Frame = -3 Query: 238 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 516 A++CG V+G+LA CI +L G P CC GV +LN ARTTPDRQ AC CL A + P +NA AAGLP+ CGV+IPYKIS +T+C+ VR Sbjct: 26 ALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANAFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 7.356e-23 Identity = 51/91 (56.04%), Postives = 62/91 (68.13%), Query Frame = -3 Query: 241 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 513 ITCG V+ LAPCI +L+ G CC G+++LN AA TTPDR+ ACNCLK A + GIN AAGLP CGV IPY ISP+T+C+ V Sbjct: 28 ITCGMVSSKLAPCIGYLKGGPL--GGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCNAV 116
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.356e-23 Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = -3 Query: 241 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNC-LKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 516 AI+CGQV+ ++ PC+A+ R G P C +GVRSLN AARTT DR+AACNC LK A G+NA A+ +P +CGV +PY IS + DCSRV Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.255e-22 Identity = 49/91 (53.85%), Postives = 66/91 (72.53%), Query Frame = -3 Query: 241 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 513 +TCGQV G+LA CI FL+ GG PP CC GV+++ ++RTT DR+A C+CLK A + GIN N A LP +CGV+IPYKIS +T+C+ + Sbjct: 1 MTCGQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.651e-22 Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = -3 Query: 238 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 516 A++CG VTG LAPCI +L TGG P CC GV+ L AA TT DRQAACNCLK A + +N AA LP +C V+IPYKIS T+C+ ++ Sbjct: 26 AVSCGTVTGDLAPCIPYL-TGGAGPTDSCCAGVKKLLAAAPTTADRQAACNCLKTAAGNINNLNPGNAAALPGKCNVNIPYKISTTTNCNTIK 117
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.062e-21 Identity = 47/91 (51.65%), Postives = 63/91 (69.23%), Query Frame = -3 Query: 241 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 513 ++CG V +A CI +LR G P CCNGV++L +A TT DR+ AC CL A ++ G+N +AAGLP +CGVSIPYKISP+T+C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAA-CCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.036e-21 Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = -3 Query: 247 AITCGQVTGSLAPCIAFLRTGG-RFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRST-PGINANVAAGLPRQCGVSIPY--KISPNTDCS 516 A++CG+V +L PC +L GG P P CCNGVR LNG TT DR+ AC C+K A R+ PG+NA+ AAG+PR+CG+ IPY +I NT C+ Sbjct: 26 ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.271e-21 Identity = 47/94 (50.00%), Postives = 62/94 (65.96%), Query Frame = -3 Query: 238 AITCGQVTGSLAPCIAFLRTGGRFPPPP-CCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 516 A+TC VT +L PC+ +L+ G PPP CC GVRSL AA+T DR+ ACNC+K A + T +N VAA L QCGV + Y +SPN +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CB304679 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.271e-21 Identity = 47/94 (50.00%), Postives = 62/94 (65.96%), Query Frame = -3 Query: 238 AITCGQVTGSLAPCIAFLRTGGRFPPPP-CCNGVRSLNGAARTTPDRQAACNCLKQAYRSTPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 516 A+TC VT +L PC+ +L+ G PPP CC GVRSL AA+T DR+ ACNC+K A + T +N VAA L QCGV + Y +SPN +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94 The following BLAST results are available for this feature:
BLAST of CB304679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304679 ID=CB304679; Name=CB304679; organism=Citrus sinensis; type=EST; length=608bpback to top |