CB304703

Overview
NameCB304703
Unique NameCB304703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304703 vs. ExPASy Swiss-Prot
Match: ERG7_CANAL (Lanosterol synthase OS=Candida albicans GN=ERG7 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.522e-16
Identity = 58/180 (32.22%), Postives = 92/180 (51.11%), Query Frame = -3
Query:   75 PHTSVQNLLWDTLYNVVEPVLNRWPLNQLREKSLEIAMNHIHYEDEASRYMTIGCIEKPLNML-SCWVEDPNSDYFKKHLSRISEYLWVGEDGMKVQSF-GSQTWDCAIAVQALLACSLTGE--IGPILMKAHDFLKKSQVTDNPPGDFKRMFRHISKGGWTFSNKDHGWPVSDCTAEAL 602
            PHT + +   +++ +  E V  +W LN + +K  ++ +     E + + Y+ I  +    NM+ +C  E   S+ FKK  +R+++ L+ G  GM V    G Q WD A  VQ      L  +     ++ K++ FL +SQ T+N        FR   KG W FS K+ G+ VSDCTAEA+
Sbjct:  285 PHTKILDFA-NSILSKWEAVRPKWLLNWVNKKVYDLIVK----EYQNTEYLCIAPVSFAFNMVVTCHYEGSESENFKKLQNRMNDVLFHGPQGMTVMGTNGVQVWDAAFMVQYFFMTGLVDDPKYHDMIRKSYLFLVRSQFTENCVDG---SFRDRRKGAWPFSTKEQGYTVSDCTAEAM 456          
BLAST of CB304703 vs. ExPASy Swiss-Prot
Match: ERG7_SCHPO (Lanosterol synthase OS=Schizosaccharomyces pombe GN=erg7 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.227e-15
Identity = 56/184 (30.43%), Postives = 91/184 (49.46%), Query Frame = -3
Query:   63 PHTSVQNLLWDTLYNVVEPVLNRWPLNQLREKSLEIAMNHIHYEDEASRYMTIGCIEKPLNMLSCWV-EDPNSDYFKKHLSRISEYLWVGEDGMKVQSF-GSQTWDCAIAVQALLACSLTGE--IGPILMKAHDFLKKSQVTDNPPGDFKRMFRHISKGGWTFSNKDHGWPVSDCTAEALLCCL 602
            PHT +     D L  ++E        + L++     A   I  ED+ + Y  IG +   +N +  +  E P+S  F+KH+ R+ +++WV  +GM ++   G Q W+ +  +QAL+   L  +    P + KA +FL + Q+     G     +R+ S G W FSN   G+ VSD T+EAL   L
Sbjct:  285 PHTQIL----DRLNWILEKYFTYLRPSWLKKLGTRRAYELIKIEDQNTDYSCIGPVNAAMNTVCVYFHEGPSSKAFQKHIQRLHDFMWVQPEGMLMRGTNGLQVWETSFTLQALVESGLYEKEAFKPDIAKALEFLDRQQIRTQYEGSG---YRYNSLGAWPFSNITQGYTVSDTTSEALRAVL 461          
The following BLAST results are available for this feature:
BLAST of CB304703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ERG7_CANAL6.522e-1632.22Lanosterol synthase OS=Candida albicans GN=ERG7 PE... [more]
ERG7_SCHPO4.227e-1530.43Lanosterol synthase OS=Schizosaccharomyces pombe G... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIIaR_F09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIIaR_F09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304703 ID=CB304703; Name=CB304703; organism=Citrus sinensis; type=EST; length=604bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAACAATTTCTGGTCGCAT
CATTGAGAAGTGTAGACAACACAGTAAGGCTTCTGCAGTACAATCAGAAA
CTGGCCATCCGTGATCTTTATTAGAAAATGTCCATCCTCCTTTAGAAATA
TGACGAAACATTCTTTTAAAATCTCCTGGAGGATTATCAGTGACCTGAGA
CTTTTTAAGGAAGTCATGTGCTTTCATAAGTATTGGACCAATTTCGCCAG
TAAGACTGCAAGCAAGTAAAGCTTGAACGGCAATAGCACAATCCCATGTT
TGACTACCGAAGCTCTGCACTTTCATTCCATCTTCTCCAACCCATAAGTA
CTCGCTGATCCTAGAAAGATGCTTCTTAAAATAATCGCTGTTAGGATCTT
CGACCCAACAAGAGAGCATATTCAATGGCTTTTCAATACATCCAATAGTC
ATATACCGACTGGCCTCATCTTCATAATGAATGTGATTCATTGCAATTTC
TAGAGACTTCTCTCTCAATTGGTTAAGAGGCCAACGATTAAGAACGGGCT
CAACTACATTATATAGAGTATCCCAAAGCAAGTTTTGAACGGAAGTATGA
GGAA
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