CB304724
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25 Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = -1 Query: 254 LVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 580 + +++ +L+ AP +A+TCGQV + LAPCI + P CC GVR+LN AA TT DRQ C CLK+ + G++P++ A +PS+CGV IPY ISPS DC RV Sbjct: 10 VAAVMVVALLLAAPAASAVTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 58/111 (52.25%), Postives = 74/111 (66.67%), Query Frame = -1 Query: 254 LVCALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 580 LV + +L+ P T AI+CGQV ++++PC+ + R GG P CCSGVRSLN AA TT DR+ ACNCLK G+I G+ AA++PS+CGV IPY ISPS DC V Sbjct: 8 LVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 59/116 (50.86%), Postives = 78/116 (67.24%), Query Frame = -1 Query: 251 KLVCALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLK---RAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 583 KL C LL C++V P+T+ A++CG V ++LA CI ++ GG PP CCSGV++LN A+TTPDRQ ACNC++ RA G+ G+ AA +P CGV IPYKIS S +C VR Sbjct: 6 KLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPA-CCSGVKNLNSIAKTTPDRQQACNCIQGAARALGS--GLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 58/111 (52.25%), Postives = 74/111 (66.67%), Query Frame = -1 Query: 254 LVCALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 580 LV + +L+ P T AI+CGQV ++++PC+ + R GG P CCSGVRSLN AA TT DR+ ACNCLK G+I G+ AA++PS+CGV IPY ISPS DC V Sbjct: 8 LVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP4_ARATH (Non-specific lipid-transfer protein 4 OS=Arabidopsis thaliana GN=LTP4 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.218e-25 Identity = 53/105 (50.48%), Postives = 73/105 (69.52%), Query Frame = -1 Query: 251 LLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 565 +L + + A V AITCG V +SL+PC+ +L GG PPPCC+GV+ LNG A+TTPDRQ AC CL+ A +G+ P++A+ LP +CGV IPY IS S +C ++ Sbjct: 12 VLTVFIVASVDAAITCGTVASSLSPCLGYLSKGG-VVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSA---AKGVNPSLASGLPGKCGVSIPYPISTSTNCATIK 112
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.488e-25 Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = -1 Query: 254 VCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 577 V A ++ +L AI+CGQV++++A C+ + R G P CCSGVRSLN AARTT DR+AACNCLK A I G+ AA++PS+CGV +PY IS S DC RV Sbjct: 10 VVAAVVVVLAATTSEAAISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.168e-25 Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = -1 Query: 254 LVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 580 ++C + C++ +A +AI+CGQVT+ L PC +L GG PP CC+GVR LN AA+TTPDRQ AC CLK I N A +LP +CG+ I YKI+P+ DC ++ Sbjct: 8 VLCVAVACMVFSASYADAISCGQVTSGLVPCFGYLAAGGPVPPA-CCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.168e-25 Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = -1 Query: 254 LLLCILVTAPVTNAI-TCGQVTASLAPCIPFLRTGGRFPPP-PCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 568 ++ +L T P A+ TCGQVT +LAPC+ +LR+ P P CC+ VR LN AARTT D++ AC CLK+ + G+ N AA LP++CGV IPYKISP+ DC RV Sbjct: 13 VMYMVLATTPNAEAVLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.223e-24 Identity = 57/110 (51.82%), Postives = 74/110 (67.27%), Query Frame = -1 Query: 254 LVCALLLCILVTAP-VTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 580 ++ AL+ +L+ AP AITCGQV +++ PC+ + R GG P CCSGVRSL AA TT DR+ ACNCLK A I+G+ AA++PS+CGV +PY IS S DC RV Sbjct: 7 VLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.223e-24 Identity = 57/110 (51.82%), Postives = 74/110 (67.27%), Query Frame = -1 Query: 254 LVCALLLCILVTAP-VTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 580 ++ AL+ +L+ AP AITCGQV +++ PC+ + R GG P CCSGVRSL AA TT DR+ ACNCLK A I+G+ AA++PS+CGV +PY IS S DC RV Sbjct: 7 VLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115 The following BLAST results are available for this feature:
BLAST of CB304724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304724 ID=CB304724; Name=CB304724; organism=Citrus sinensis; type=EST; length=583bpback to top |