CB304730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: THIO1_CAEEL (Thioredoxin-1 OS=Caenorhabditis elegans GN=trx-1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15 Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = -2 Query: 210 KKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 464 +K+I++DF A+WC PCK ++P+ EL +IF KVDVDE + + ++ V+ MPTF+ TK G +E + G +DEL+ V +H Sbjct: 27 EKIIILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVEDELRQKVLEH 111
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: THIO_MACMU (Thioredoxin OS=Macaca mulatta GN=TXN PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.577e-15 Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = -2 Query: 213 AAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEK 470 A KL+VVDF+A+WC PCK++ P L +K V+FL+VDVD+ + VA E V+ MPTF K+G+ + GA K++L+ + + Sbjct: 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: THIO_CALJA (Thioredoxin OS=Callithrix jacchus GN=TXN PE=3 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.577e-15 Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = -2 Query: 213 AAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEK 470 A KL+VVDF+A+WC PCK++ P L +K V+FL+VDVD+ + VA E V+ MPTF K+G+ + GA K++L+ + + Sbjct: 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: THIO_RABIT (Thioredoxin OS=Oryctolagus cuniculus GN=TXN PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.060e-15 Identity = 36/86 (41.86%), Postives = 56/86 (65.12%), Query Frame = -2 Query: 213 AAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEK 470 A KL+VVDF+A+WC PCK++ P L +K V+F++VDVD+ K +A E V+ MPTF K+G+ + GA K++L+ + + Sbjct: 18 AGDKLVVVDFSATWCGPCKMIKPFFHALSEKFNNVVFIEVDVDDCKDIAAECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: TRX3_YEAST (Thioredoxin-3, mitochondrial OS=Saccharomyces cerevisiae GN=TRX3 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.513e-15 Identity = 37/80 (46.25%), Postives = 56/80 (70.00%), Query Frame = -2 Query: 216 IVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVE 455 +V+DF A+WC PCK+M P L++L + P V F+K DVDE +A+E V AMPTFVL K+G+++ +I+GA L+ ++ Sbjct: 46 LVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQLIGKIIGANPTALEKGIK 125
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: THIO_MOUSE (Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 3.513e-15 Identity = 39/96 (40.62%), Postives = 62/96 (64.58%), Query Frame = -2 Query: 210 EQLQKGIAAK--KLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 491 E Q+ +AA KL+VVDF+A+WC PCK++ P L K V+FL+VDVD+ + VA + V+ MPTF K+G+ + GA K++L+ ++ ++ Sbjct: 9 EAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDVDDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEASITEY 104
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: THIO_GEOCY (Thioredoxin OS=Geodia cydonium GN=THIO PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.992e-15 Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = -2 Query: 210 AAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVL-ERIVGAKKDELQLAVEKH 470 A KL+V+DFTASWC PC+ ++P E+ K+ P VIF KVDVDE AE ++AMPTF K GK L + + GA + L+ ++K+ Sbjct: 18 AGDKLVVIDFTASWCGPCQRIAPKYVEMAKEFPDVIFYKVDVDENDETAEAEKIQAMPTFKFYKSGKALSDYVQGANEAGLREKIKKN 105
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: THIO_RAT (Thioredoxin OS=Rattus norvegicus GN=Txn PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 7.826e-15 Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = -2 Query: 219 EQLQKGIAAK--KLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAV 491 E Q+ +AA KL+VVDF+A+WC PCK++ P L K V+FL+VDVD+ + VA + V+ MPTF K+G+ + GA K++L+ + Sbjct: 9 EAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDVDDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEATI 101
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: TRXL4_ARATH (Thioredoxin-like 4 OS=Arabidopsis thaliana GN=At1g11530 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.022e-14 Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = -2 Query: 216 QVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVE 527 +V+ + ESWN + + IV FTA WC P M+ EL +FL VDVDE+K VA + V+AMPTF+ K+G ++++VGA DE++ V+ Sbjct: 3 RVVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVDVDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEIKKRVD 106
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: THIO_COPCM (Thioredoxin OS=Coprinus comatus PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.022e-14 Identity = 41/107 (38.32%), Postives = 67/107 (62.62%), Query Frame = -2 Query: 213 QVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELPKKLPA--VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEK 527 QVIS ++ +N+ G K+I++DF A+WC PC+++SPI + +K A ++F KVDVD ++EE + AMPTF + K+G+ ++ +VGA L+ V+K Sbjct: 3 QVIS--NLDEFNKLTNSG----KIIIIDFWATWCGPCRVISPIFEKFSEKYGANNIVFAKVDVDTASDISEEAKIRAMPTFQVYKDGQKIDELVGANPTALESLVQK 103 The following BLAST results are available for this feature:
BLAST of CB304730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304730 ID=CB304730; Name=CB304730; organism=Citrus sinensis; type=EST; length=630bpback to top |