CB304763
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304763 vs. ExPASy Swiss-Prot
Match: ARL4D_HUMAN (ADP-ribosylation factor-like protein 4D OS=Homo sapiens GN=ARL4D PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 2.822e-23 Identity = 54/123 (43.90%), Postives = 79/123 (64.23%), Query Frame = -1 Query: 268 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRGAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH-WYIQSTCATSGEGLYEGLDWLSNNIANK 633 + I+F VWDVGGQ+K+RPLWR Y + T GL+FVVD+ + +R+ EA+ ELHR+ + +G +LV ANKQD P A++AAE+ +L + L ++Q A G GL +GL+ L I + Sbjct: 68 RGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVRELAAATLTHVQGCSAVDGLGLQQGLERLYEMILKR 190
BLAST of CB304763 vs. ExPASy Swiss-Prot
Match: ARL6_MOUSE (ADP-ribosylation factor-like protein 6 OS=Mus musculus GN=Arl6 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.686e-23 Identity = 50/120 (41.67%), Postives = 84/120 (70.00%), Query Frame = -1 Query: 277 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDEL--RGAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 630 ++SFTV+D+ GQ + R LW HY+++ Q +IFV+DS+D+ R+V A++EL +LN ++ R +L FANK DL +++ + +++ L L S++ + W+I ++ A GEGL EG+DWL + I Sbjct: 62 SLSFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDSVTSVKVSQLLCLESIKDKPWHICASDAIKGEGLQEGVDWLQDQI 181
BLAST of CB304763 vs. ExPASy Swiss-Prot
Match: ARL6_BOVIN (ADP-ribosylation factor-like protein 6 OS=Bos taurus GN=ARL6 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.686e-23 Identity = 50/120 (41.67%), Postives = 82/120 (68.33%), Query Frame = -1 Query: 277 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDEL--RGAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 630 ++SFTV+D+ GQ + R LW HY++ Q +IFV+DS+D+ R+V A++EL +LN ++ R +L FANK DL +A+ + +++ L L ++ + W+I ++ A GEGL EG+DWL + I Sbjct: 62 SLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEELRTLLNHPDIKHRRIPILFFANKMDLRDALTSVKVSQLLCLEDIKDKPWHICASDAIKGEGLQEGVDWLQDQI 181
BLAST of CB304763 vs. ExPASy Swiss-Prot
Match: ARL4D_BOVIN (ADP-ribosylation factor-like protein 4D OS=Bos taurus GN=ARL4D PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.287e-23 Identity = 54/123 (43.90%), Postives = 78/123 (63.41%), Query Frame = -1 Query: 268 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRGAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH-WYIQSTCATSGEGLYEGLDWLSNNIANK 633 + I+F VWDVGGQ+K+RPLWR Y + T GL+FVVD+ + +R+ EA+ ELHR+ + +G +LV ANKQD P A++AAE+ +L + L ++Q A G GL GL+ L I + Sbjct: 67 RGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVRELATATLTHVQGCSAVDGLGLQPGLERLYEMILKR 189
BLAST of CB304763 vs. ExPASy Swiss-Prot
Match: ARL6_CAEBR (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis briggsae GN=arl-6 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.951e-22 Identity = 53/121 (43.80%), Postives = 79/121 (65.29%), Query Frame = -1 Query: 277 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDEL--RGAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 633 +N+SF +D+ GQ K R W YF ++QG+IFV+DS+DR R+ +DEL +L+ ++ RG +++ ANK D+P AM A+IT LGL+ R W I STCA +G+GL + + LS+ I Sbjct: 61 QNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRVRMELLKDELWLVLDHKDVASRGIPVVILANKMDIPGAMTCADITAALGLNLHRSGTWSIHSTCALTGDGLDKAMQQLSSEI 181
BLAST of CB304763 vs. ExPASy Swiss-Prot
Match: ARL6_CAEEL (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis elegans GN=arl-6 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.548e-21 Identity = 52/121 (42.98%), Postives = 78/121 (64.46%), Query Frame = -1 Query: 277 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDEL--RGAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 633 +N+SF +D+ GQ K R W YF ++QG+IFV+DS+DR R+ +DEL ++ ++ RG +++ ANK D+P AM A++IT LGL+ R W I STCA +G+GL + + LS I Sbjct: 61 QNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPGAMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQLSAEI 181
BLAST of CB304763 vs. ExPASy Swiss-Prot
Match: ARL_SCHPO (ADP-ribosylation factor-like protein alp41 OS=Schizosaccharomyces pombe GN=alp41 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.641e-21 Identity = 45/122 (36.89%), Postives = 78/122 (63.93%), Query Frame = -1 Query: 277 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRGAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 642 +E + + FT+WD+GGQ +R W++YF++T+ +I+VVDS D R+ E R+ L +L E++L +LV ANK D+ A+++ EI+ L + + HW I S A +G + + + WL+N++ Sbjct: 55 LEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDL 176
BLAST of CB304763 vs. ExPASy Swiss-Prot
Match: ARL5C_HUMAN (Putative ADP-ribosylation factor-like protein 5C OS=Homo sapiens GN=ARL5C PE=2 SV=4) HSP 1 Score: 101.679 bits (252), Expect = 3.450e-21 Identity = 45/116 (38.79%), Postives = 74/116 (63.79%), Query Frame = -1 Query: 274 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRGAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA 621 F +WD+ + + +W Y+ NT+ +I V+DS DRDR++ R+EL++ML + L+ A +L+FANKQD+ ++M EI+ L L +++ W+IQ CA + EGL L W+ + A Sbjct: 62 FFMWDIVRPEALSFIWNTYYSNTEFIILVIDSTDRDRLLTTREELYKMLAHEALQDASVLIFANKQDVKDSMRMVEISHFLTLSTIKDHSWHIQGCCALTREGLPARLQWMESQAA 177
BLAST of CB304763 vs. ExPASy Swiss-Prot
Match: ARL14_MOUSE (ADP-ribosylation factor-like protein 14 OS=Mus musculus GN=Arl14 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.450e-21 Identity = 47/112 (41.96%), Postives = 75/112 (66.96%), Query Frame = -1 Query: 301 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD-SNDRDRIVEARDELHRMLNEDELRGAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEG 630 +++ TVWDVGGQ+K+R +W Y +N QGL++VVD S + R+ ++R E +L + ++ +++ ANKQDLP A++A +IT + L R+WY+Q CA +GEGL +G Sbjct: 57 SLTLTVWDVGGQEKMRTVWDCYCENAQGLMYVVDCSEGKKRLEDSRKEFKHILKNEHIKNTPVVILANKQDLPGALSAEDITRMFKVKKLCSNRNWYVQPCCAVTGEGLDDG 168
BLAST of CB304763 vs. ExPASy Swiss-Prot
Match: ARL3_PONAB (ADP-ribosylation factor-like protein 3 OS=Pongo abelii GN=ARL3 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.505e-21 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = -1 Query: 268 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRGAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 642 V+ + VWD+GGQ KIRP W++YF+NT L EL +L E++L +L+FANKQDL A A+EI + L LH++R R W IQS A +GEG+ +G++W+ N+ K Sbjct: 56 VQSQGFKLNVWDIGGQRKIRPYWKNYFENTDIL-----------------ELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 163 The following BLAST results are available for this feature:
BLAST of CB304763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 198
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304763 ID=CB304763; Name=CB304763; organism=Citrus sinensis; type=EST; length=642bpback to top |