CB304764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304764 vs. ExPASy Swiss-Prot
Match: THIO_CHLLT (Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA PE=1 SV=5) HSP 1 Score: 68.5514 bits (166), Expect = 1.147e-11 Identity = 32/85 (37.65%), Postives = 54/85 (63.53%), Query Frame = -1 Query: 168 VVVDFTASWCGPCRFIAPFLAELAKKLPN-VLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHL 416 V+VDF ASWCGPC + P + +LA + K++VDE ++A + + ++PT + +K GK+VD++VGA K + + I +H+ Sbjct: 23 VLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIAGQYGIRSIPTMLIIKGGKVVDQMVGALPKNMIAKKIDEHI 107
BLAST of CB304764 vs. ExPASy Swiss-Prot
Match: TRXF_BRANA (Thioredoxin F-type, chloroplastic OS=Brassica napus GN=TRXF PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11 Identity = 33/89 (37.08%), Postives = 55/89 (61.80%), Query Frame = -1 Query: 153 VVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVD-ELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 416 VV+D WCGPC+ IAP L++K +V+FLK+D + E + +A + + +PTF LK+ ++V +V GAK ++L I + +S+ Sbjct: 93 VVLDMYTQWCGPCKVIAPKYKALSEKYEDVVFLKLDCNPENRPLAKELGIRVVPTFKILKDNQVVKEVTGAKYDDLVAAIETARSASSS 181
BLAST of CB304764 vs. ExPASy Swiss-Prot
Match: TXND2_MOUSE (Thioredoxin domain-containing protein 2 OS=Mus musculus GN=Txndc2 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.360e-11 Identity = 30/81 (37.04%), Postives = 51/81 (62.96%), Query Frame = -1 Query: 174 VVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAK 416 V VDF+A+WCGPCR + P L+ K +V+FL+VD ++ + + D + +PTF F K + V + GA +L+++I++ Sbjct: 433 VAVDFSAAWCGPCRMMKPLFHSLSLKHEDVIFLEVDTEDCEQLVQDCEIFHLPTFQFYKNEEKVGEFSGALVGKLERSISE 513
BLAST of CB304764 vs. ExPASy Swiss-Prot
Match: TRXM_ORYSJ (Thioredoxin M-type, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.360e-11 Identity = 33/87 (37.93%), Postives = 56/87 (64.37%), Query Frame = -1 Query: 162 VVVDFTASWCGPCRFIAPFLAELAKK-LPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHLAT 416 V+V+F A WCGPCR IAP + ELAK+ + + KV+ D+ ++AT++ + ++PT + K G+ + V+GA K L I K++++ Sbjct: 86 VLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKYVSS 172
BLAST of CB304764 vs. ExPASy Swiss-Prot
Match: THIO1_CORNE (Thioredoxin C-1 OS=Corynebacterium nephridii PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.360e-11 Identity = 31/71 (43.66%), Postives = 46/71 (64.79%), Query Frame = -1 Query: 207 VVVDFTASWCGPCRFIAPFLAELAKKLP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA 416 VVVDF A WCGPC+ IAP L E+A ++ V KV++DE +A + V ++PT + K+G++ +VGA Sbjct: 21 VVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDENPELAAQFGVRSIPTLLMFKDGELAANMVGA 91
BLAST of CB304764 vs. ExPASy Swiss-Prot
Match: THIO_MYCTU (Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 7.438e-11 Identity = 30/72 (41.67%), Postives = 49/72 (68.06%), Query Frame = -1 Query: 204 VVVDFTASWCGPCRFIAPFLAELA-KKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK 416 V+VDF A+WCGPC+ +AP L E+A ++ ++ K+DVD A ++ V ++PT + K+G+ V ++VGAK Sbjct: 28 VLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAK 99
BLAST of CB304764 vs. ExPASy Swiss-Prot
Match: THIO_MYCBO (Thioredoxin OS=Mycobacterium bovis GN=trxA PE=3 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 7.438e-11 Identity = 30/72 (41.67%), Postives = 49/72 (68.06%), Query Frame = -1 Query: 204 VVVDFTASWCGPCRFIAPFLAELA-KKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK 416 V+VDF A+WCGPC+ +AP L E+A ++ ++ K+DVD A ++ V ++PT + K+G+ V ++VGAK Sbjct: 28 VLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAK 99
BLAST of CB304764 vs. ExPASy Swiss-Prot
Match: THIO_CHLAA (Thioredoxin OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trxA PE=1 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 7.438e-11 Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = -1 Query: 180 VVVDFTASWCGPCRFIAPFLAELAKKLPNVLFL-KVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTI 416 VVVDF A WCGPCR IAP L +LA + L + KV+ D+ A+ ++ +PT + K+G+ V ++VGA+ E + + I Sbjct: 23 VVVDFWAPWCGPCRVIAPILDKLAGEYAGRLTIAKVNTDDNVQYASQLGIQGIPTLVIFKDGREVGRLVGARPEAMYREI 102 The following BLAST results are available for this feature:
BLAST of CB304764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304764 ID=CB304764; Name=CB304764; organism=Citrus sinensis; type=EST; length=419bpback to top |