CB304781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.176e-25 Identity = 53/109 (48.62%), Postives = 71/109 (65.14%), Query Frame = -2 Query: 224 LVCALLLCILVTAPVTNAITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 550 ++C + C++ +A +AI+CGQVT+ L P +L GG PP CC+GVR LN AA+TTPDRQ AC CLK N I N A LP +CG+ I YKI+P+ DCS++ Sbjct: 8 VLCVAVACMVFSASYADAISCGQVTSGLVPCFGYLAAGGPVPPA-CCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.842e-25 Identity = 59/115 (51.30%), Postives = 78/115 (67.83%), Query Frame = -2 Query: 221 LVCALLLCILVTAPVTN--AITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLK---RAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 550 L C LL C++V P+T+ A++CG V ++LA I ++ GG PP CCSGV++LN A+TTPDRQ ACNC++ RA G+ G+ AAG+P CGV IPYKIS ST+C VR Sbjct: 7 LACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPA-CCSGVKNLNSIAKTTPDRQQACNCIQGAARALGS--GLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.080e-24 Identity = 56/107 (52.34%), Postives = 73/107 (68.22%), Query Frame = -2 Query: 224 LLLCILVTAPVTNAI-TCGQVTASLAPRIPFLRTGGRFPPP-PCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 538 ++ +L T P A+ TCGQVT +LAP + +LR+ P P CC+ VR LN AARTT D++ AC CLK+ G+ N AAGLP++CGV IPYKISP+TDC+RV Sbjct: 13 VMYMVLATTPNAEAVLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.080e-24 Identity = 53/107 (49.53%), Postives = 72/107 (67.29%), Query Frame = -2 Query: 224 CALLLCILVTAPVTNAITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 544 CAL++C++V AP+ AITCG V + LAP I +L+ G P CC G++SLN AA + DR+ AC CLK A + +GI AA LP QCGV +PY ISP+T+C+ + Sbjct: 11 CALVMCMMVAAPLAEAITCGLVASKLAPCIGYLQ-GAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.842e-24 Identity = 57/111 (51.35%), Postives = 74/111 (66.67%), Query Frame = -2 Query: 224 LVCALLLCILVTAPVTN--AITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 550 ++ AL+ +L+ P T AI+CGQV ++++P + + R GG P CCSGVRSLN AA TT DR+ ACNCLK G+ G+ AA +PS+CGV IPY ISPS DCS V Sbjct: 7 VLVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.103e-24 Identity = 51/106 (48.11%), Postives = 72/106 (67.92%), Query Frame = -2 Query: 221 LLLCILVTAPVTNAITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 538 L+L + + A V AI+CG V SLAP +L GG PP CC+GV++LN A+TTPDRQ AC C++ + G+ P++A+GLP +CGV IPY IS ST+C+ ++ Sbjct: 11 LVLTVCIVASVDAAISCGTVAGSLAPCATYLSKGG-LVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.103e-24 Identity = 57/111 (51.35%), Postives = 72/111 (64.86%), Query Frame = -2 Query: 224 LVCALLLCILVTAPVTN--AITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 550 LV + +L+ P T AI+CGQV ++++P + + R GG P CCSGVRSLN AA TT DR+ ACNCLK G+ G+ AA +PS+CGV IPY ISPS DCS V Sbjct: 8 LVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.103e-24 Identity = 56/108 (51.85%), Postives = 71/108 (65.74%), Query Frame = -2 Query: 224 VCALLLCILVTAPVTNAITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 547 V A ++ +L AI+CGQV++++A + + R G P CCSGVRSLN AARTT DR+AACNCLK A G+ AA +PS+CGV +PY IS STDCSRV Sbjct: 10 VVAAVVVVLAATTSEAAISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 4.103e-24 Identity = 57/111 (51.35%), Postives = 72/111 (64.86%), Query Frame = -2 Query: 224 LVCALLLCILVTAPVTN--AITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 550 LV + +L+ P T AI+CGQV ++++P + + R GG P CCSGVRSLN AA TT DR+ ACNCLK G+ G+ AA +PS+CGV IPY ISPS DCS V Sbjct: 8 LVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.359e-24 Identity = 53/110 (48.18%), Postives = 72/110 (65.45%), Query Frame = -2 Query: 221 LVCALLLCILVTAPVTNAITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 550 LV L+ ++ AI+CGQV+++L+P I + R G PP CCSGV+ L GAA++T D+QAAC C+K A G G+ AAG+PS CGV +PY IS S DCS++R Sbjct: 9 LVLVALVAAMLLVAADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115 The following BLAST results are available for this feature:
BLAST of CB304781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304781 ID=CB304781; Name=CB304781; organism=Citrus sinensis; type=EST; length=551bpback to top |