CB304781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.999e-24 Identity = 54/109 (49.54%), Postives = 69/109 (63.30%), Query Frame = -2 Query: 221 VCALLLCILVTAPVTNAITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 547 VC LLL + +AITCGQV + L + + R GG PP CC+GVR+LN A+TTPDRQ ACNCLK + G+ + AG+P +CGV IPY I TDC++VR Sbjct: 7 VCFLLLLAFLIG-TASAITCGQVDSDLTSCLGYARKGGVIPPG-CCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.194e-23 Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = -2 Query: 221 LVCALLLCILVTAPVTNAITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 550 LV ++ ++ AI+CGQV+++L+P I + R G PP CCSGV+ L GAA++T D+QAAC C+K A G G+ AAG+PS CGV +PY IS S DCS++R Sbjct: 9 LVLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.194e-23 Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = -2 Query: 221 LVCALLLCILVTAPVTNAITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 550 LV ++ ++ AI+CGQV+++L+P I + R G PP CCSGV+ L GAA++T D+QAAC C+K A G G+ AAG+PS CGV +PY IS S DCS++R Sbjct: 9 LVLVAMVAAMLIVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.660e-23 Identity = 56/110 (50.91%), Postives = 72/110 (65.45%), Query Frame = -2 Query: 224 LVCALLLCILVTAP-VTNAITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 550 ++ AL+ +L+ AP AITCGQV +++ P + + R GG P CCSGVRSL AA TT DR+ ACNCLK A +G+ AA +PS+CGV +PY IS S DCSRV Sbjct: 7 VLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.660e-23 Identity = 56/110 (50.91%), Postives = 72/110 (65.45%), Query Frame = -2 Query: 224 LVCALLLCILVTAP-VTNAITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 550 ++ AL+ +L+ AP AITCGQV +++ P + + R GG P CCSGVRSL AA TT DR+ ACNCLK A +G+ AA +PS+CGV +PY IS S DCSRV Sbjct: 7 VLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 5.925e-23 Identity = 57/112 (50.89%), Postives = 69/112 (61.61%), Query Frame = -2 Query: 221 LVCALLLCILVTAPVTN-AITCGQVTASLAPRIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 550 L C ++LC+LV AP+ AI+ QV +SL P + ++R P PP C G+RSL AAR DRQAAC C+K I VAAGLP QC V IPYKISPS DC RV+ Sbjct: 9 LACVVVLCLLVDAPLAQGAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.738e-23 Identity = 54/112 (48.21%), Postives = 68/112 (60.71%), Query Frame = -2 Query: 221 LVCALLLCILVTAPVTN--AITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 550 L C + C++V P+T+ A++CG V+ +AP I +L P CCSGV SLN ARTTPDRQ AC CL A I AAGLP CGV IPYKIS +T+C+ V+ Sbjct: 7 LACLIFACMIVAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.011e-22 Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = -2 Query: 221 LVCALLLCILVTAPVTN--AITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 550 L C +L C++V P+T+ A++CG V+ +AP I +L G P CC+GV +LN ARTTPDRQ AC CL A + + AAGLP CGV IPYKIS ST+C+ VR Sbjct: 7 LACLVLACMIVAGPITSNAALSCGTVSGYVAPCIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.724e-22 Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = -2 Query: 224 ITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 496 +TCGQV +LA I FL+ GG PP CC+GV+++ ++RTT DR+A C+CLK A G RGI PN A LP +CGV IPYKIS ST+C+ + Sbjct: 1 MTCGQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of CB304781 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.941e-22 Identity = 53/116 (45.69%), Postives = 74/116 (63.79%), Query Frame = -2 Query: 221 LVCALLLCILVTAPVT--NAITCGQVTASLAPRIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTNRGIKPNV----AAGLPSQCGVRIPYKISPSTDCSRVR 550 L C +L C++V P+T A+TCG V +++AP I ++ GG P CC+GV LN ARTTPDRQ AC CL+ A R + PN+ AAG+P CGV +P+ IS +T+C+ V+ Sbjct: 7 LACLVLACMIVAGPITANRALTCGTVNSNVAPCIGYITQGGTLPGA-CCTGVSKLNSMARTTPDRQQACRCLETAA---RALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118 The following BLAST results are available for this feature:
BLAST of CB304781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304781 ID=CB304781; Name=CB304781; organism=Citrus sinensis; type=EST; length=551bpback to top |