CB304784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: TRXR1_MOUSE (Thioredoxin reductase 1, cytoplasmic OS=Mus musculus GN=Txnrd1 PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16 Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = -3 Query: 246 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGLPDRIFMKLVLC--AKTNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLRTPTR 605 K DY VP+ VF+ G GLSEE+A++++G+ I+V+ + F PL+ T+ + ++C +V+G + G +A E+ QGFA A+K GLTK D+ +G+HP AE F L R Sbjct: 478 KCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKIICNLKDDERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTIGIHPVCAEIFTTLSVTKR 601
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: TRXR3_MOUSE (Thioredoxin reductase 3 (Fragment) OS=Mus musculus GN=Txnrd3 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.486e-15 Identity = 47/119 (39.50%), Postives = 69/119 (57.98%), Query Frame = -3 Query: 261 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAK--TNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPL 605 K DY +P+ VF+ G GLSEE+AI+ Y +++V+ F PL+ T++G + ++C K +V+G + G +A EI QGFA A+K GLTK D +G+HPT E F L Sbjct: 562 KCDYINIPTTVFTPLEYGCCGLSEEKAIEMYKKENLEVYHTLFWPLEWTVAGRDNNTCYAKIICNKFDNERVVGFHLLGPNAGEITQGFAAAMKCGLTKQLLDDTIGIHPTCGEVFTTL 680
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: TRXR3_HUMAN (Thioredoxin reductase 3 OS=Homo sapiens GN=TXNRD3 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.534e-15 Identity = 46/119 (38.66%), Postives = 70/119 (58.82%), Query Frame = -3 Query: 261 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTN--KVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPL 605 K DY VP+ VF+ G GLSEE+AI+ Y +++++ F PL+ T++G + ++C K + +V+G + G +A E+ QGFA A+K GLTK D +G+HPT E F L Sbjct: 619 KCDYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEIYHTLFWPLEWTVAGRENNTCYAKIICNKFDHDRVIGFHILGPNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEVFTTL 737
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: GSHR_CAEEL (Probable glutathione reductase 2 OS=Caenorhabditis elegans GN=trxr-2 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.309e-15 Identity = 45/135 (33.33%), Postives = 81/135 (60.00%), Query Frame = -3 Query: 207 YSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGLPDRIFMKL-VLCAK--TNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLRTPTRKIRKSPPSEGMTG 596 + V + VF+ + VGL+EE+AIQ++G+ I+VF ++F P + + D F + +C + + K+LGL G +A E++QG+AVA + G++ +D + +HP ++EEFV L T++ + P ++G G Sbjct: 370 FDGVATTVFTPLELSTVGLTEEEAIQKHGEDSIEVFHSHFTPFEYVVPQNKDSGFCYVKAVCTRDESQKILGLHFVGPNAAEVIQGYAVAFRVGISMSDLQNTIAIHPCSSEEFVKLHI-TKRSGQDPRTQGCCG 503
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: TRXR2_BOVIN (Thioredoxin reductase 2, mitochondrial OS=Bos taurus GN=TXNRD2 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.322e-15 Identity = 47/122 (38.52%), Postives = 73/122 (59.84%), Query Frame = -3 Query: 246 DYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGLP-DRIFMKLVLCAKTNK-VLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLRTPTR 599 DYS+VP+ VF+ G VGLSEE A+ +G+ ++V+ A ++PL+ T+ + ++K+V + + VLGL G +A E++QGFA+ +K G + VG+HPT AEE LR R Sbjct: 378 DYSSVPTTVFTPLEYGCVGLSEEAAVARHGEEHVEVYHAFYKPLEFTVPQRDASQCYIKMVCLREPPQLVLGLHFLGPNAGEVIQGFALGIKCGASYQQLMRTVGIHPTCAEEVAKLRISKR 499
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: TRXR1_CAEEL (Thioredoxin reductase 1 OS=Caenorhabditis elegans GN=trxr-1 PE=2 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15 Identity = 47/136 (34.56%), Postives = 76/136 (55.88%), Query Frame = -3 Query: 207 DYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDR--IFMKLV-LCAKTNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLRTPTRKIRKSPPSEGMTG 599 +Y +P+ VF+ G GLSEE A+ +YG +I ++ F PL+ T+S D+ ++K++ L + KV+G + +A E+ QGF +A+K KADFD +G+HPT AE F L ++ + + G G Sbjct: 532 EYDQIPTTVFTPLEYGCCGLSEEDAMMKYGKDNIIIYHNVFNPLEYTISERMDKDHCYLKMICLRNEEEKVVGFHILTPNAGEVTQGFGIALKLAAKKADFDRLIGIHPTVAENFTTLTLEKKEGDEELQASGCUG 667
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: TRXR2_MOUSE (Thioredoxin reductase 2, mitochondrial OS=Mus musculus GN=Txnrd2 PE=1 SV=4) HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15 Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = -3 Query: 246 TKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGLP-DRIFMKLVLCAKTNK-VLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLRTPTR 608 T DYS VP+ VF+ G VGLSEE+A+ +G ++V+ A ++PL+ T++ + ++K+V + + VLGL G +A E+ QGFA+ +K G + A VG+HPT +EE V L R Sbjct: 388 TLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHISKR 512
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: TRXR1_RAT (Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus GN=Txnrd1 PE=1 SV=4) HSP 1 Score: 80.1073 bits (196), Expect = 9.629e-15 Identity = 49/124 (39.52%), Postives = 75/124 (60.48%), Query Frame = -3 Query: 246 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATL-SGLPDRIFMKLVLCAKTN-KVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLRTPTR 605 K DY VP+ VF+ G GLSEE+A++++G+ I+V+ + F PL+ T+ S ++ + K++ K N +V+G + G +A E+ QGFA A K GLTK D+ +G+HP AE F L R Sbjct: 364 KCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKVICNLKDNERVVGFHVLGPNAGEVTQGFA-AAKCGLTKQQLDSTIGIHPVCAEIFTTLSVTKR 486
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: TRXR2_RAT (Thioredoxin reductase 2, mitochondrial OS=Rattus norvegicus GN=Txnrd2 PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 8.151e-14 Identity = 47/125 (37.60%), Postives = 74/125 (59.20%), Query Frame = -3 Query: 246 TKPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGLP-DRIFMKLVLCAKTNK-VLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLRTPTR 608 T +YS VP+ VF+ G VGLSEE+A+ +G I+V+ A ++PL+ T++ + ++K+V + + VLGL G +A E+ QGFA+ ++ G + A VG+HPT +EE V L R Sbjct: 390 TLMNYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHIEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIQCGASYAQVMQTVGIHPTCSEEVVKLHISKR 514
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: TRXR2_DROME (Thioredoxin reductase 2, mitochondrial OS=Drosophila melanogaster GN=Trxr-2 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.425e-12 Identity = 49/130 (37.69%), Postives = 69/130 (53.08%), Query Frame = -3 Query: 222 DYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDR-IFMKLVL-CAKTNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLRTPTRKIRKSPPS 599 DY+ V + VF+ VG+SEE AI+ G +I+VF ++P + + R ++K V + K+LGL G A E++QGFA A+K GLT VG+HPT AEEF L R R P+ Sbjct: 383 DYADVATTVFTPLEYSCVGMSEETAIELRGADNIEVFHGYYKPTEFFIPQKSVRHCYLKAVAEVSGDQKILGLHYIGPVAGEVIQGFAAALKTGLTVKTLLNTVGIHPTTAEEFTRLSITKRSGRDPTPA 512 The following BLAST results are available for this feature:
BLAST of CB304784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304784 ID=CB304784; Name=CB304784; organism=Citrus sinensis; type=EST; length=610bpback to top |