CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 6.070e-64
Identity = 124/185 (67.03%), Postives = 146/185 (78.92%), Query Frame = -1
Query:   31 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEA 585
            GG TRIPKV QL+ DFF GKEL KS NPDE  X        IL+G  +++ + LLLLDV P +LG+ETAGGVMT LI RNTTIP KK Q+FSTY DNQPGV IQV+EGERT T+D +LLG F+LSGIPPAPRGVPQI V FD+DANGIL+VSAE+K  G++N+I I NDKGRLSK +IE+MV +A
Sbjct:  341 GGSTRIPKVMQLVSDFFGGKELNKSINPDEAVXYGAAVQAFILTGGKSKQTEGLLLLDVAPLTLGIETAGGVMTALIKRNTTIPTKKSQIFSTYSDNQPGVHIQVFEGERTMTKDCHLLGTFDLSGIPPAPRGVPQIEVTFDLDANGILSVSAEEKGTGKRNQIVITNDKGRLSKADIERMVSDA 525          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 6.070e-64
Identity = 122/186 (65.59%), Postives = 144/186 (77.42%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQLL++FFNGKE  K  NPDE          +ILSGEG E+ +++LLLDV P +LG+ET GGVMT LIPRNT IP KK QVF+TY D Q  V IQV+EGER+ T+D  LLGKF+L+GI PAPRG PQI V F++DANGILNV AEDK  G+  KITI NDKGRLS++EIE+MV+EAE
Sbjct:  370 GGSTRIPKVQQLLKEFFNGKEPSKGVNPDEAVAFGAAVQGSILSGEGGEETKEILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTIQVFEGERSLTKDCRLLGKFDLTGIAPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNDKGRLSQEEIERMVREAE 555          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.352e-63
Identity = 123/185 (66.49%), Postives = 144/185 (77.84%), Query Frame = -1
Query:   31 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEA 585
            GG TRIPKV QL+ DFF GKEL KS  PDE           IL+G  +++ + LLLLDVTP +LG+ETAGGVMT LI RNTTIP KK Q+FSTY DNQPGV IQV+EGER  T+D +LLG FELSGIPP PRGVPQI V FD+DANGILNVSAE+K  G++N+I + NDKGRLS+ EIE+MV+EA
Sbjct:  341 GGSTRIPKVMQLVSDFFRGKELKKSIQPDEAVAYGAAVQAFILTGGKSKQTEGLLLLDVTPLTLGIETAGGVMTSLIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFELSGIPPPPRGVPQIEVTFDLDANGILNVSAEEKGTGKRNQIVLTNDKGRLSRAEIERMVREA 525          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.352e-63
Identity = 121/186 (65.05%), Postives = 143/186 (76.88%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQLL+DFF GKE  K  NPDE           ILSGEG ++ +D+LLLDV P +LG+ET GGVMT LIPRNT IP KK QVF+TY D Q  V IQV+EGER+ T+D  LLGKF+L+GIPPAPRG PQI V F++DANGILNV AEDK  G+  KITI N+KGRLS++EI++MV+EAE
Sbjct:  369 GGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLNGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQEEIDRMVKEAE 554          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 1.766e-63
Identity = 120/186 (64.52%), Postives = 143/186 (76.88%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQLL+DFF GKE  K  NPDE           ILSGEG ++ +D+LLLDV P +LG+ET GGVMT LIPRNT IP KK QVF+TY D Q  V IQV+EGER+ T+D  LLGKF+L+G+PPAPRG PQI V F++DANGILNV AEDK  G+  KITI N+KGRLS++EI++MV+EAE
Sbjct:  369 GGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLTGVPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQEEIDRMVKEAE 554          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.307e-63
Identity = 125/187 (66.84%), Postives = 147/187 (78.61%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEK-VQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIP++Q+L+ DFFNGKE  KS NPDE          AILSG+   K   ++LLLDV P S+G+ETAGGVMT LI RNTTIP KK + FST+ DNQPGVLIQV+EGER RT++NNLLGKFEL+GIPPAP GVPQI V FD+DANGI+NVSA +K  G+ NKI I NDKGRLSK+EIE+M+ EAE
Sbjct:  335 GGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDSTSKSTNEILLLDVAPLSVGIETAGGVMTPLIKRNTTIPTKKSETFSTFADNQPGVLIQVFEGERARTKENNLLGKFELTGIPPAP-GVPQIEVTFDVDANGIMNVSALEKGIGKTNKIVITNDKGRLSKEEIERMLAEAE 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: BIP4_TOBAC (Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.307e-63
Identity = 121/186 (65.05%), Postives = 143/186 (76.88%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQLL+D+F+GKE  K  NPDE           ILSGEG ++ +D+LLLDV P +LG+ET GGVMT LIPRNT IP KK QVF+TY D Q  V IQV+EGER+ T+D  LLGKF+L+GI PAPRG PQI V F++DANGILNV AEDK  G+  KITI NDKGRLS++EIE+MV+EAE
Sbjct:  371 GGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTIQVFEGERSLTKDCRLLGKFDLTGIAPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNDKGRLSQEEIERMVKEAE 556          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 240.35 bits (612), Expect = 5.139e-63
Identity = 124/186 (66.67%), Postives = 143/186 (76.88%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ LLQDFF+GK L  S NPDE          AILSG+ + K+QD+LL+DV P SLG+ETAGGVMT LI RN  IP K+ + FSTY DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V FD+DANGILNVSA++ + G+   ITI NDKGRLS+ EI++MV EAE
Sbjct:  336 GGSTRIPKVQSLLQDFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYADNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIKNDKGRLSQAEIDRMVNEAE 521          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 5.139e-63
Identity = 124/186 (66.67%), Postives = 143/186 (76.88%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ LLQDFF+GK L  S NPDE          AILSG+ + K+QD+LL+DV P SLG+ETAGGVMT LI RN  IP K+ + FSTY DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V FD+DANGILNVSA++ + G+   ITI NDKGRLS+ EI++MV EAE
Sbjct:  336 GGSTRIPKVQSLLQDFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYADNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIKNDKGRLSQAEIDRMVNEAE 521          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 5.139e-63
Identity = 120/186 (64.52%), Postives = 144/186 (77.42%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+L+++FFNGK++ K  NPDE           +LSGE  E V+D++L+DV P +LG+ET+GGVMT LI RNT IP +K Q+FST  DNQP VLIQVYEGER   +DNNLLGKFEL+GIPPAPRGVPQI V F +D+NGIL VSA DK  G+ N ITI NDKGRLSK+EIEK ++EAE
Sbjct:  373 GGSTRIPKVQELIENFFNGKKISKGINPDEAVAFGAAVQGGVLSGE--EGVEDIVLIDVNPLTLGIETSGGVMTTLIKRNTPIPTQKSQIFSTAADNQPVVLIQVYEGERAMAKDNNLLGKFELTGIPPAPRGVPQIEVTFTLDSNGILKVSATDKGTGKSNSITITNDKGRLSKEEIEKKIEEAE 556          
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP74_TRYBB6.070e-6467.03Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
BIP_SPIOL6.070e-6465.59Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
HSP70_TRYCR1.352e-6366.49Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
BIP1_ARATH1.352e-6365.05Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
BIP2_ARATH1.766e-6364.52Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
HSP71_PARBA2.307e-6366.84Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
BIP4_TOBAC2.307e-6365.05Luminal-binding protein 4 OS=Nicotiana tabacum GN=... [more]
HSP71_DROME5.139e-6366.67Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_DROME5.139e-6366.67Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
GRP78_PICAN5.139e-6364.5278 kDa glucose-regulated protein homolog OS=Pichia... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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