CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11598 contig Csv1_Contig11598:259..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 6.712e-63
Identity = 120/186 (64.52%), Postives = 144/186 (77.42%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQLL+D+FNGKE  K  NPDE          +ILSGEG ++ +D+LLLDV P +LG+ET GGVMT LIPRNT IP KK QVF+TY D Q  V IQV+EGER+ T+D  LLGKF+L+GIP APRG PQI V F++DANGILNV AEDK  G+  KITI N+KGRLS++EI++MV+EAE
Sbjct:  367 GGSTRIPKVQQLLKDYFNGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSMTKDCRLLGKFDLNGIPSAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAE 552          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 8.766e-63
Identity = 121/176 (68.75%), Postives = 139/176 (78.98%), Query Frame = -1
Query:   58 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKD 585
            GG TRIPKVQ L+ DFF GKEL KS NPDE           IL+G  +++ + LLLLDVTP +LG+ETAGGVMT LI RNTTIP KK Q+FSTY DNQPGV IQV+EGER  T+D +LLG F+LSGIPPAPRGVPQI V FD+DANGILNVSAE+K  G++N+ITI NDKGRLSKD
Sbjct:  341 GGSTRIPKVQSLVSDFFGGKELNKSINPDEAVAYGAAVQAFILTGGKSKQTEGLLLLDVTPLTLGIETAGGVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAEEKGTGKRNQITITNDKGRLSKD 516          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 8.766e-63
Identity = 120/186 (64.52%), Postives = 142/186 (76.34%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQLL+D+F+GKE  K  NPDE           ILSGEG ++ +D+LLLDV P +LG+ET GGVMT  IPRNT IP KK QVF+TY D Q  V IQV+EGER+ T+D   LGKF+L+GIPPAPRG PQI V F++DANGILNV AEDK  G+  KITI NDKGRLS++EIE+MV+EAE
Sbjct:  370 GGSTRIPKVQQLLKDYFDGKEPSKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKFIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRNLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKAEKITITNDKGRLSQEEIERMVREAE 555          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 8.766e-63
Identity = 120/186 (64.52%), Postives = 142/186 (76.34%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQLL+D+F+GKE  K  NPDE           ILSGEG ++ +D+LLLDV P +LG+ET GGVMT LIPRNT IP KK QVF+TY D Q  V I V+EGER+ T+D  LLGKF+L+GI PAPRG PQI V F++DANGILNV AEDK  G+  KITI NDKGRLS++EIE+MV+EAE
Sbjct:  370 GGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTISVFEGERSLTKDCRLLGKFDLTGIAPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNDKGRLSQEEIERMVKEAE 555          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.145e-62
Identity = 116/186 (62.37%), Postives = 148/186 (79.57%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQ+F NGKEL KS NPDE          AILSG+ +++++D+LL+DV P SLG+ETAGGVM+ +I RNT +P K  Q F+TY DNQPGV IQV+EGER  T+DNN LG+FELSGIPPAPRG P+I V FDIDANGI++V+A+D++ G+ NKITI ND  RLSKD+I++M+ +AE
Sbjct:  338 GGSTRIPKIQKLLQEFLNGKELNKSINPDEAVAYGAAVQAAILSGDKSDEIKDVLLVDVAPLSLGIETAGGVMSKIIERNTRVPTKASQTFTTYSDNQPGVSIQVFEGERAMTKDNNRLGQFELSGIPPAPRGRPKIEVSFDIDANGIMHVTAKDESSGRSNKITITNDSDRLSKDDIDRMINDAE 523          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 1.495e-62
Identity = 123/186 (66.13%), Postives = 143/186 (76.88%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ LLQ+FF+GK L  S NPDE          AILSG+ + K+QD+LL+DV P SLG+ETAGGVMT LI RN  IP K+ + FSTY DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V FD+DANGILNVSA++ + G+   ITI NDKGRLS+ EI++MV EAE
Sbjct:  336 GGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIKNDKGRLSQAEIDRMVNEAE 521          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 1.495e-62
Identity = 123/186 (66.13%), Postives = 143/186 (76.88%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ LLQ+FF+GK L  S NPDE          AILSG+ + K+QD+LL+DV P SLG+ETAGGVMT LI RN  IP K+ + FSTY DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V FD+DANGILNVSA++ + G+   ITI NDKGRLS+ EI++MV EAE
Sbjct:  336 GGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIKNDKGRLSQAEIDRMVNEAE 521          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 1.495e-62
Identity = 123/186 (66.13%), Postives = 143/186 (76.88%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ LLQ+FF+GK L  S NPDE          AILSG+ + K+QD+LL+DV P SLG+ETAGGVMT LI RN  IP K+ + FSTY DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V FD+DANGILNVSA++ + G+   ITI NDKGRLS+ EI++MV EAE
Sbjct:  336 GGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIKNDKGRLSQAEIDRMVNEAE 521          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP72_DROSI (Major heat shock 70 kDa protein Ba OS=Drosophila simulans GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 1.495e-62
Identity = 123/186 (66.13%), Postives = 143/186 (76.88%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ LLQ+FF+GK L  S NPDE          AILSG+ + K+QD+LL+DV P SLG+ETAGGVMT LI RN  IP K+ + FSTY DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V FD+DANGILNVSA++ + G+   ITI NDKGRLS+ EI++MV EAE
Sbjct:  336 GGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIKNDKGRLSQAEIDRMVNEAE 521          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 1.495e-62
Identity = 123/186 (66.13%), Postives = 143/186 (76.88%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ LLQ+FF+GK L  S NPDE          AILSG+ + K+QD+LL+DV P SLG+ETAGGVMT LI RN  IP K+ + FSTY DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V FD+DANGILNVSA++ + G+   ITI NDKGRLS+ EI++MV EAE
Sbjct:  336 GGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIKNDKGRLSQAEIDRMVNEAE 521          
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BIP3_MAIZE6.712e-6364.52Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
HSP70_LEIMA8.766e-6368.75Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
BIP_SOLLC8.766e-6364.52Luminal-binding protein OS=Solanum lycopersicum PE... [more]
BIP5_TOBAC8.766e-6364.52Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
HSP74_PARLI1.145e-6262.37Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP75_DROME1.495e-6266.13Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME1.495e-6266.13Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP73_DROME1.495e-6266.13Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROSI1.495e-6266.13Major heat shock 70 kDa protein Ba OS=Drosophila s... [more]
HSP72_DROME1.495e-6266.13Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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