CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11598 contig Csv1_Contig11598:259..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.234e-58
Identity = 112/186 (60.22%), Postives = 142/186 (76.34%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ LLQ+FF GK L  S NPDE          AILSG+ + +++D+LL+DV P SLG+ETAGGVMT LI RN+ IP K+ + F+TY DNQP V IQV+EGER  T+DNN+LG F+L+G+PPAPRGVP+I V FD+DANGILNV+A+++  G    ITI NDKGRLS+ +I++M+ EAE
Sbjct:  336 GGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEIKDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALTKDNNVLGTFDLTGVPPAPRGVPKIDVTFDLDANGILNVTAKEQGTGNAKNITIKNDKGRLSQADIDRMLSEAE 521          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7C_DROME (Heat shock 70 kDa protein cognate 3 OS=Drosophila melanogaster GN=Hsc70-3 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 2.918e-58
Identity = 113/186 (60.75%), Postives = 138/186 (74.19%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQL++DFF GKE  +  NPDE           +LSGE  +    ++LLDV P ++G+ET GGVMT LIPRNT IP KK QVFST  DNQ  V IQVYEGER  T+DN+LLGKF+L+GIPPAPRG+PQI V F+IDANGIL VSAEDK  G K KI I ND+ RL+ ++I++M+++AE
Sbjct:  363 GGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAGVLSGE--QDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQVFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVSFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPEDIDRMIRDAE 546          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.918e-58
Identity = 119/186 (63.98%), Postives = 138/186 (74.19%), Query Frame = -1
Query:   31 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANG-ILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEA 585
            GG TRIPKVQ+LLQ FF GK L  S NPDE          AILSG+ + ++QD+LL+DV P SLG+ETAGGVM  +I RN  IP K+ Q FSTY DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V FD+DANG  LNVSA++ + G    ITI NDKGRLS+ EI++MV EA
Sbjct:  335 GGSTRIPKVQRLLQSFFCGKSLNLSINPDEAVAYGAAVQAAILSGDKSTEIQDVLLVDVAPLSLGIETAGGVMAKIIERNCRIPCKQTQTFSTYSDNQPGVNIQVYEGERVMTKDNNRLGTFDLSGIPPAPRGVPQIEVTFDVDANGNNLNVSAKEMSSGNAKNITIKNDKGRLSQAEIDRMVNEA 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.918e-58
Identity = 118/186 (63.44%), Postives = 135/186 (72.58%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQLL+ FFNGK+  K  NPDE           +LSGE  E V+D++LLDV   +LG+ET GGVMT LI RNT IP KK Q+FST  DNQ  V IQVYEGER   +DNNLLG FELS I  APRGVPQI V F +DANGIL VSA DK  G+   ITIANDKGRLS+D+I++MV+EAE
Sbjct:  384 GGSTRIPKVQQLLEKFFNGKKASKGINPDEAVAYGAAVQAGVLSGE--EGVEDIVLLDVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQKAVRIQVYEGERAMVKDNNLLGNFELSDIRAAPRGVPQIEVTFALDANGILTVSATDKDTGKSESITIANDKGRLSQDDIDRMVEEAE 567          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: GRP78_ASHGO (78 kDa glucose-regulated protein homolog OS=Ashbya gossypii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 3.811e-58
Identity = 116/186 (62.37%), Postives = 137/186 (73.66%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+LL++FFN K+  K  NPDE           +LSGE  E V+D++LLDV P +LG+E  GG+MT LI RNT IP KK Q+FST  DNQ  V+IQVYEGER   +DNN LGKFELSGIPPAPRG+PQI V F +DANGIL VSA DK  G+   +TI N+KGRLSKD+IE+MV EAE
Sbjct:  380 GGSTRIPKVQELLENFFN-KKASKGINPDEAVAYGAAVQAGVLSGE--EGVEDIVLLDVNPLTLGIEVTGGIMTPLIKRNTPIPTKKSQIFSTAVDNQKTVMIQVYEGERAMAKDNNHLGKFELSGIPPAPRGIPQIEVTFALDANGILKVSATDKGTGKSESVTITNEKGRLSKDDIERMVAEAE 562          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 6.501e-58
Identity = 114/185 (61.62%), Postives = 136/185 (73.51%), Query Frame = -1
Query:   31 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEA 585
            GG TRIPK+QQLL+DFFNGKE  +  +PDE           I + E  E    L+LLD+ P +LG+ET GGVMT LIPR T +P KK QVFSTY DNQ  V IQ+YEGER+ T+DNNLLGKF+LSGIPPA RGVPQI V F++D NGIL+VSAEDK  G K  ITI NDK RLS+ +I++MV+EA
Sbjct:  366 GGSTRIPKIQQLLKDFFNGKEPNRGVHPDEAVAYGAAVQGGIFTNE--EGTDTLVLLDIAPLTLGIETVGGVMTALIPRGTFVPTKKSQVFSTYQDNQDRVSIQIYEGERSMTKDNNLLGKFDLSGIPPAQRGVPQIEVTFEMDVNGILHVSAEDKASGSKESITITNDKERLSQADIDRMVKEA 548          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: GRP78_SCHPO (78 kDa glucose-regulated protein homolog OS=Schizosaccharomyces pombe GN=bip1 PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.601e-56
Identity = 116/187 (62.03%), Postives = 140/187 (74.87%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT-PGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+LL+ FF GK+  K  NPDE           +LSGE  E   +++LLDV P +LG+ET GGVMT LI RNT IP +K Q+FST  DNQ  VLIQVYEGERT T+DNNLLGKF+L GIPPAPRGVPQI V F++DANG+L VSA DK+  G+  K+ I NDKGRLS+++IE+MV+EAE
Sbjct:  368 GGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGE--EGSDNIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAE 551          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: GRP78_ECHGR (78 kDa glucose-regulated protein OS=Echinococcus granulosus GN=GRP78 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.601e-56
Identity = 108/186 (58.06%), Postives = 137/186 (73.66%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+QQL+++FFNGKE  +  NPDE           ++SG   E   D++LLDV P ++G+ET GGVMT LIPRNT IP KK Q+FST  DNQP V IQV+EGER  T+DN+ LGKF+L+GIPPAPRG+PQI V F+ID NGIL VSAEDK  G+K+ I I  +  R++ +EIE+M+Q+AE
Sbjct:  362 GGSTRIPKIQQLVKEFFNGKEPIRGINPDEAVAYGAAVQAGVISGV--EDTGDIVLLDVCPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQPTVTIQVFEGERPMTKDNHFLGKFDLTGIPPAPRGLPQIEVTFEIDVNGILRVSAEDKGTGKKSNIVINKETNRITPEEIERMIQDAE 545          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HS7C4_DICDI (Heat shock cognate 70 kDa protein 4 OS=Dictyostelium discoideum GN=DDB_G0293678 PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 7.946e-56
Identity = 108/186 (58.06%), Postives = 136/186 (73.12%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG T+IPK+Q++ +++FNGKE   S NPDE           ++SG+G+   Q L+ L+VTP S+G+ET GG+MT L+ RNT IP KK Q FST +DNQ  VLIQ+YEGERT T+DNNL+G FEL+GIPPAPRGV QI VCFD+D +GIL VSAEDKT  +  KITI+N    LSK EIEKM+ + E
Sbjct:  338 GGSTQIPKIQRMFKEYFNGKEFNNSINPDEVVAYGAAVQSGVISGKGSNFPQ-LIFLNVTPLSMGIETVGGIMTNLVERNTHIPIKKTQTFSTQYDNQTNVLIQIYEGERTMTKDNNLIGTFELNGIPPAPRGVTQIEVCFDVDIDGILTVSAEDKTTKKVQKITISNINDHLSKVEIEKMIVDGE 522          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: GRP78_ECHMU (78 kDa glucose-regulated protein OS=Echinococcus multilocularis GN=GRP78 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.038e-55
Identity = 108/186 (58.06%), Postives = 136/186 (73.12%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+QQL+++FFN KE  +  NPDE           ++SG   E   D++LLDV P ++G+ET GGVMT LIPRNT IP KK Q+FST  DNQP V IQV+EGER  T+DN+ LGKF+L+GIPPAPRG+PQI V F+ID NGIL VSAEDK  G+K+ I I  +  RL+ +EIE+M+Q+AE
Sbjct:  362 GGSTRIPKIQQLVKEFFNVKEPSRGINPDEAVAYGAAVQAGVISGV--EDTGDIVLLDVCPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQPTVTIQVFEGERPMTKDNHFLGKFDLTGIPPAPRGLPQIEVTFEIDVNGILRVSAEDKGTGKKSNIVINKETNRLTPEEIERMIQDAE 545          
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP68_DROME2.234e-5860.22Heat shock protein 68 OS=Drosophila melanogaster G... [more]
HSP7C_DROME2.918e-5860.75Heat shock 70 kDa protein cognate 3 OS=Drosophila ... [more]
HSP70_CERCA2.918e-5863.98Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]
GRP78_KLULA2.918e-5863.4478 kDa glucose-regulated protein homolog OS=Kluyve... [more]
GRP78_ASHGO3.811e-5862.3778 kDa glucose-regulated protein homolog OS=Ashbya... [more]
BIP2_DICDI6.501e-5861.62Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
GRP78_SCHPO1.601e-5662.0378 kDa glucose-regulated protein homolog OS=Schizo... [more]
GRP78_ECHGR1.601e-5658.0678 kDa glucose-regulated protein OS=Echinococcus g... [more]
HS7C4_DICDI7.946e-5658.06Heat shock cognate 70 kDa protein 4 OS=Dictyosteli... [more]
GRP78_ECHMU1.038e-5558.0678 kDa glucose-regulated protein OS=Echinococcus m... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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