CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11598 contig Csv1_Contig11598:259..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 3.431e-75
Identity = 143/186 (76.88%), Postives = 158/186 (84.95%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNGKEL KS NPDE          AILSG+ +E VQDLLLLDVTP SLG+ETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+ G++NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  338 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAE 523          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 280.411 bits (716), Expect = 4.481e-75
Identity = 142/186 (76.34%), Postives = 158/186 (84.95%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNGKEL KS NPDE          AILSG+ +E VQDLLLLDVTP SLG+ETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGI+NVSA DK+ G++NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  338 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITNDKGRLSKEDIERMVQEAE 523          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 9.983e-75
Identity = 143/186 (76.88%), Postives = 160/186 (86.02%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQLL D+FNGKELCK+ NPDE          AIL+G+ +EK+ DLLLLDV+P SLGLETAGGVMTVLI RNTTIP KK QVFSTY DNQPGVLIQV+EGER+RT+DNN+LGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+ G+ NKITI NDKGRLSK+EIE+MV+EAE
Sbjct:  345 GGSTRIPKVQQLLIDYFNGKELCKNINPDEAVAYGAAVQAAILAGDTSEKM-DLLLLDVSPLSLGLETAGGVMTVLIKRNTTIPTKKTQVFSTYADNQPGVLIQVFEGERSRTKDNNILGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSASDKSTGKSNKITITNDKGRLSKEEIERMVEEAE 529          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.304e-74
Identity = 141/186 (75.81%), Postives = 158/186 (84.95%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQD+FNGKEL KS NPDE          AILSG+ +E VQDLLLLDVTP SLG+ETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGI+NVSA DK+ G++NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  338 GGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAE 523          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_ONCVO (Heat shock 70 kDa protein (Fragment) OS=Onchocerca volvulus PE=2 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 1.703e-74
Identity = 143/186 (76.88%), Postives = 155/186 (83.33%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+LL DFF+GKEL KS NPDE          AILSG+ +E VQDLLLLDV P SLG+ETAGGVMT LI RNTTIP K  Q F+TY DNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA+DK+ G++NKITI NDKGRLSKDEIE+MVQEAE
Sbjct:   95 GGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSKDEIERMVQEAE 280          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 4.954e-74
Identity = 142/186 (76.34%), Postives = 155/186 (83.33%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+LL DFF+GKEL KS NPDE          AILSG+ +E VQDLLLLDV P SLG+ETAGGVMT LI RNTTIP K  + F+TY DNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA+DK+ G++NKITI NDKGRLSKDEIE+MVQEAE
Sbjct:  337 GGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSETFTTYSDNQPGVLIQVYEGERALTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSKDEIERMVQEAE 522          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 8.451e-74
Identity = 142/187 (75.94%), Postives = 155/187 (82.89%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSG-EGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQLL DFFNGKE CKS NPDE          AILSG + +EK+QDLLLLDVTP SLGLETAGGVMT LI RNTT+P KK Q FSTY DNQPGVLIQV+EGER+ TRDNNLLGKF L GIPP PRGVPQI V FDIDANGILNVSA +K+ G++NKITI NDKGRL+KD+IE+MVQEAE
Sbjct:  340 GGSTRIPKVQQLLSDFFNGKEPCKSINPDEAVAFGATVQAAILSGNDSSEKLQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTVPTKKSQTFSTYADNQPGVLIQVFEGERSMTRDNNLLGKFSLDGIPPMPRGVPQIDVTFDIDANGILNVSAVEKSTGKENKITITNDKGRLTKDDIERMVQEAE 526          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.441e-73
Identity = 142/186 (76.34%), Postives = 156/186 (83.87%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+LLQDFFNG+EL KS NPDE          AIL G+ +E VQDLLLLDV P SLGLETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVLIQV+EGER  T+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA +K+ G++NKITI NDKGRLSK++IEKMVQEAE
Sbjct:  339 GGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTVLIKRNTTIPTKQTQSFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKSSGKQNKITITNDKGRLSKEDIEKMVQEAE 524          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.441e-73
Identity = 140/186 (75.27%), Postives = 157/186 (84.41%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNG+EL KS NPDE          AIL G+ +E +QDLLLLDV P SLGLETAGGVMTVLI RN+TIP K+ Q+F+TY DNQPGVLIQVYEGER  T+DN+LLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA DK+ G++NKITI NDKGRLSK+EIE+MVQEAE
Sbjct:  340 GGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDKSENLQDLLLLDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNSLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSSGKQNKITITNDKGRLSKEEIERMVQEAE 525          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 2.459e-73
Identity = 140/186 (75.27%), Postives = 155/186 (83.33%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNG+EL KS NPDE          AILSG+ +  VQDLLLLDV P SLG+ETAGGVMT LI RNTTIP K+ QVFSTY DNQPGVLIQVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI V FDIDANGILNVSA DK+ G +NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  340 GGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILSGDTSGNVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKQTQVFSTYADNQPGVLIQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGNENKITITNDKGRLSKEDIERMVQEAE 525          
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_BOVIN3.431e-7576.88Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP70_ONCMY4.481e-7576.34Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HSP70_PYRSA9.983e-7576.88Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP7C_DANRE1.304e-7475.81Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP70_ONCVO1.703e-7476.88Heat shock 70 kDa protein (Fragment) OS=Onchocerca... [more]
HSP70_BRUMA4.954e-7476.34Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HSP70_ACHKL8.451e-7475.94Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HSP70_XENLA1.441e-7376.34Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_PLEWA1.441e-7375.27Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP71_ORYLA2.459e-7375.27Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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