CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPB (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain BisB18) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.575e-48
Identity = 103/186 (55.38%), Postives = 130/186 (69.89%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ++++  F GKE  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGV T +I RNTTIP KK QVFST  DNQ  V I+V++GER    DN +LG+F+L GIPP+PRG+PQI V FDIDANGI+NVSA DK  G++ +I I    G LS+ +I KMV++AE
Sbjct:  336 GGMTRMPKVQEVVKQLF-GKEPHKGVNPDEVVAIGAAIQAGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRIIERNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKILGQFDLMGIPPSPRGMPQIEVTFDIDANGIVNVSARDKATGKEQQIRI-QASGGLSEADINKMVKDAE 515          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_PAVLU (Chaperone protein dnaK OS=Pavlova lutherii GN=dnaK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.575e-48
Identity = 104/186 (55.91%), Postives = 129/186 (69.35%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIP V++L++D   GKE  ++ NPDE           +LSGE    V+D+LLLDVTP SLG+ET GGV T +IPRNTT+P KK ++FST  DNQP V I V +GER   RDN  LG F L GI PAPRG+PQI V FDIDANGIL+V+A+DK   ++  ITI+     L K+E+EKMV+EAE
Sbjct:  335 GGSTRIPAVKKLVKDIL-GKEPNETVNPDEVVAIGAAIQAGVLSGE----VKDILLLDVTPLSLGVETLGGVTTKIIPRNTTVPTKKSEIFSTAVDNQPNVEIHVLQGEREFARDNKSLGTFRLDGILPAPRGIPQIEVTFDIDANGILSVTAQDKGTSKQQSITISG-ASTLPKEEVEKMVKEAE 514          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_NOVAD (Chaperone protein dnaK OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.575e-48
Identity = 103/186 (55.38%), Postives = 133/186 (71.51%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKV+++++DFF GKE     NPDE           +L G+    V+D+LLLDVTP SLG+ET GG+MT +I RNTTIP KK QV+ST  DNQ  V I+V++GER   +DN LLG+F+L GIPPA RGVPQI V FDIDANGI+NVSA+DK  G++ +I I    G LS  +I++MV++AE
Sbjct:  340 GGMTRMPKVREVVKDFF-GKEPHTGVNPDEVVAMGAAIQAGVLQGD----VKDVLLLDVTPLSLGIETLGGIMTKMIDRNTTIPTKKSQVYSTAEDNQQAVTIRVFQGEREMAQDNKLLGQFDLVGIPPARRGVPQIEVTFDIDANGIVNVSAKDKGTGKEQQIRI-QASGGLSDADIDQMVRDAE 519          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_MARAV (Chaperone protein dnaK OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.575e-48
Identity = 106/186 (56.99%), Postives = 130/186 (69.89%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ +++FF GKE  K  NPDE          A+LSG+    V+D+LLLDVTP +LG+ET GGV T LI +NTTIP KK Q+FST  DNQ  V I V +GER +   N  LG+F+L+ IPPAPRGVPQI V FDIDANGILNVSA+DK  G++  I I    G L+ DEIEKMV++AE
Sbjct:  341 GGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAMGAAIQGAVLSGD----VKDVLLLDVTPLTLGIETMGGVATPLIEKNTTIPTKKSQIFSTADDNQTAVTIHVVQGERKQAAQNKSLGRFDLADIPPAPRGVPQIEVTFDIDANGILNVSAKDKATGKEQSIVIKASSG-LNDDEIEKMVRDAE 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_KLEP7 (Chaperone protein dnaK OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.575e-48
Identity = 106/186 (56.99%), Postives = 130/186 (69.89%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + +FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GIL+VSA+DK  G++ KITI    G L+++EI+KMV+EAE
Sbjct:  341 GGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTALISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEEEIQKMVREAE 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_HAMD5 (Chaperone protein dnaK OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.575e-48
Identity = 110/186 (59.14%), Postives = 127/186 (68.28%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + DFF GKE  K  NPDE           +LSGE    V+DLLLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG  QI V FDIDA+GIL+VSA+DK  G++ KITI    G LS+ EIEKMV++AE
Sbjct:  341 GGQTRMPMVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGE----VKDLLLLDVTPLSLGIETMGGVMTSLISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAIDNKSLGQFNLDGIQPAPRGTSQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSG-LSEAEIEKMVRDAE 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_HAHCH (Chaperone protein dnaK OS=Hahella chejuensis (strain KCTC 2396) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.575e-48
Identity = 105/186 (56.45%), Postives = 130/186 (69.89%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ  + DFF GKE  K  NPDE          A+LSG+    V+D+LLLDVTP SL +ET GGV T +I +NTTIP KK QVFST  DNQ  V I V +GER + + N  LG+F+L+G+PPAPRGVPQ+ V FDIDANGI++VSA+DK  G++  I I    G LS+DEI+KMVQ+AE
Sbjct:  340 GGQTRMPLVQSKVADFF-GKEARKDVNPDEAVAIGAAIQGAVLSGD----VKDVLLLDVTPLSLSIETMGGVSTPIIEKNTTIPTKKSQVFSTAEDNQTAVTIHVLQGERKQAQMNKSLGRFDLTGLPPAPRGVPQVEVTFDIDANGIMHVSAKDKATGKEQSIVIKASSG-LSEDEIDKMVQDAE 519          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_GEOUR (Chaperone protein dnaK OS=Geobacter uraniireducens (strain Rf4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.575e-48
Identity = 106/186 (56.99%), Postives = 129/186 (69.35%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ +QD F GK   +S NPDE           +L G+    V+D+LLLDVTP SLG+ET GGVMT LI +N TIP +K Q+FST  DNQP V I V +GER  + DN  LG FELSGIPPAPRGVPQI V FDIDANGI++VSA+D   G++  I I    G LSK+EI+KMV++AE
Sbjct:  336 GGMTRMPIVQKKVQDIF-GKVPNRSVNPDEVVAIGAAIQGGVLRGD----VKDVLLLDVTPLSLGIETLGGVMTRLIEKNATIPCRKSQIFSTAADNQPAVSIHVLQGEREMSTDNKTLGNFELSGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQSIRITASSG-LSKEEIDKMVKDAE 515          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_CORDI (Chaperone protein dnaK OS=Corynebacterium diphtheriae GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.575e-48
Identity = 102/186 (54.84%), Postives = 130/186 (69.89%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V +L+++   G+E  K  NPDE           +L GE    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP K+ + F+T  DNQP V IQV++GER     N LLG FEL GI PAPRGVPQI V FDIDANGI++V+A+DK  G++N I I +  G LS++EI++MV++AE
Sbjct:  314 GGSTRMPAVSELVKELTGGREPNKGVNPDEVVAVGAALQAGVLRGE----VKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVFQGEREIAAHNKLLGSFELGGIAPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIKIQDGSG-LSQEEIDRMVKDAE 494          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_ACTP7 (Chaperone protein dnaK OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.575e-48
Identity = 106/186 (56.99%), Postives = 128/186 (68.82%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQQ + +FF GKE  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGVMTVLI +NTTIP KK QVFST  DNQ  V I V +GER +   N  LG+F L GI PAPRG+PQI V FDIDANG++NVSA+DK  G++ +I I    G LS +EIEKMV++AE
Sbjct:  340 GGQTRMPLVQQKVAEFF-GKEARKDVNPDEAVAIGAAVQGGVLKGD----VKDVLLLDVTPLSLGIETMGGVMTVLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKQASANKSLGQFNLEGINPAPRGMPQIEVTFDIDANGVINVSAKDKNTGKEQQIRIQASSG-LSDEEIEKMVRDAE 519          
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RHOPB3.575e-4855.38Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_PAVLU3.575e-4855.91Chaperone protein dnaK OS=Pavlova lutherii GN=dnaK... [more]
DNAK_NOVAD3.575e-4855.38Chaperone protein dnaK OS=Novosphingobium aromatic... [more]
DNAK_MARAV3.575e-4856.99Chaperone protein dnaK OS=Marinobacter aquaeolei (... [more]
DNAK_KLEP73.575e-4856.99Chaperone protein dnaK OS=Klebsiella pneumoniae su... [more]
DNAK_HAMD53.575e-4859.14Chaperone protein dnaK OS=Hamiltonella defensa sub... [more]
DNAK_HAHCH3.575e-4856.45Chaperone protein dnaK OS=Hahella chejuensis (stra... [more]
DNAK_GEOUR3.575e-4856.99Chaperone protein dnaK OS=Geobacter uraniireducens... [more]
DNAK_CORDI3.575e-4854.84Chaperone protein dnaK OS=Corynebacterium diphther... [more]
DNAK_ACTP73.575e-4856.99Chaperone protein dnaK OS=Actinobacillus pleuropne... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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