CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_WOLWR (Chaperone protein dnaK OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=dnaK PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.669e-48
Identity = 106/186 (56.99%), Postives = 128/186 (68.82%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKV + +++FF GK+  +  NPDE           I+ G+    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER    DN LLG+F L GIPPAPRG PQI V FDIDANGI +VSA+DK  G++ KI I    G LS DEI +MV+EAE
Sbjct:  335 GGMTRMPKVIEKVKEFF-GKDPHRGVNPDEVVAIGAAIQAGIIQGD----VRDVLLLDVTPLSLGIETLGGVFTPLIERNTTIPTKKSQVFSTAEDNQTAVTIKVHQGERKLAVDNKLLGQFSLEGIPPAPRGRPQIEVTFDIDANGIAHVSAKDKATGKEQKIRI-QSSGGLSDDEINRMVKEAE 514          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_SYNAS (Chaperone protein dnaK OS=Syntrophus aciditrophicus (strain SB) GN=dnaK PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.669e-48
Identity = 103/186 (55.38%), Postives = 130/186 (69.89%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P+VQQ +++ F+ +E  K  NPDE           +L GE    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP +K Q+FST  DNQP V I V +GER+   DN  LG+F+L GIPPAPRG+PQI V FDIDANGI++VSA+D   G++  I I    G LS+ EIEK+V+EAE
Sbjct:  336 GGMTRMPRVQQKVKEIFD-REPHKGVNPDEVVAVGAAIQGGVLGGE----VKDVLLLDVTPLSLGIETLGGVMTKLIEKNTTIPTRKSQIFSTAADNQPAVSIHVLQGERSMAGDNRTLGRFDLVGIPPAPRGIPQIEVTFDIDANGIVHVSAKDLGTGKEQSIKITASSG-LSETEIEKLVREAE 515          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_STRCO (Chaperone protein dnaK OS=Streptomyces coelicolor GN=dnaK PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.669e-48
Identity = 99/186 (53.23%), Postives = 128/186 (68.82%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V +L+++   GK+  K  NPDE           +L GE    V+D+LLLDVTP SLG+ET GG+MT LI RNTTIP K+ ++F+T  DNQP V IQVY+GER     N  LG FEL+G+PPAPRGVPQI V FDIDANGI++V+A+D   G++ K+T+      L KDE+++M QEAE
Sbjct:  311 GGSTRMPAVAELVKELTGGKDANKGVNPDEVVAIGAALQAGVLKGE----VKDVLLLDVTPLSLGIETKGGIMTKLIERNTTIPTKRSEIFTTAEDNQPSVQIQVYQGEREIAAYNKKLGMFELTGLPPAPRGVPQIEVAFDIDANGIMHVTAKDLGTGKEQKMTVTGGSS-LPKDEVDRMRQEAE 491          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_RHOMR (Chaperone protein dnaK OS=Rhodothermus marinus GN=dnaK PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.669e-48
Identity = 105/185 (56.76%), Postives = 127/185 (68.65%), Query Frame = -1
Query:   31 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEA 585
            GG TRIP VQ+ +++FF GK+  KS NPDE           +LSGE    VQD+LLLDVTP +LG+ET GGVMTVLIP NTTIP +K ++F+T  DNQ  V I V +G R    DN  LG+F L GIPPAPRGVPQI V FDIDANGIL+VSA DK  G++  I I    G L+ +EIE+M +EA
Sbjct:  339 GGSTRIPLVQRTVEEFF-GKKANKSVNPDEVVAIGAAIQAGVLSGE----VQDVLLLDVTPLNLGIETLGGVMTVLIPANTTIPTRKSEIFTTASDNQTSVEIHVLQGNREMAADNRSLGRFILDGIPPAPRGVPQIEVTFDIDANGILHVSARDKATGKEQSIRIEASSG-LTPEEIERMREEA 517          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_PSEFS (Chaperone protein dnaK OS=Pseudomonas fluorescens (strain SBW25) GN=dnaK PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.669e-48
Identity = 105/186 (56.45%), Postives = 132/186 (70.97%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQQ + +FF GKE  K  NPDE          A+L+G+    V+D+LLLDV+P +LG+ET GGVMT LI +NTTIP KK QVFST  DNQ  V I V +GER +   N  LGKF+L+ IPPAPRGVPQI V FDIDANGIL+V A+DK  G++ KITI  + G LS +EI++M+++AE
Sbjct:  341 GGQTRMPLVQQKVTEFF-GKEARKDVNPDEAVAMGAAIQGAVLAGD----VKDVLLLDVSPLTLGIETMGGVMTALIEKNTTIPTKKSQVFSTADDNQGAVTIHVLQGERKQAAQNKSLGKFDLAEIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKEQKITIKANSG-LSDEEIQQMIRDAE 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_PARDP (Chaperone protein dnaK OS=Paracoccus denitrificans (strain Pd 1222) GN=dnaK PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.669e-48
Identity = 105/186 (56.45%), Postives = 129/186 (69.35%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKV + +  FF GKE  K  NPDE           +L G+    V+D++LLDVTP SLG+ET GGV T LI RNTTIP KK Q+FST  DNQ  V I+V++GER    DN LLG+F L  IPPAPRG+PQI V FDIDANGI++VSA+DK  G++ KITI    G LS DEI++MV++AE
Sbjct:  337 GGMTRMPKVVEEVTAFF-GKEPHKGVNPDEVVALGAAIQAGVLQGD----VKDVVLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQIFSTAEDNQNAVTIRVFQGEREMAADNKLLGQFNLENIPPAPRGMPQIEVTFDIDANGIVSVSAKDKGTGKEQKITI-QASGGLSDDEIDRMVKDAE 516          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_KLEP3 (Chaperone protein dnaK OS=Klebsiella pneumoniae (strain 342) GN=dnaK PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.669e-48
Identity = 106/186 (56.99%), Postives = 130/186 (69.89%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + +FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GIL+VSA+DK  G++ KITI    G L+++EI+KMV+EAE
Sbjct:  341 GGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTALINKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEEEIQKMVREAE 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_HAEDU (Chaperone protein dnaK OS=Haemophilus ducreyi GN=dnaK PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 4.669e-48
Identity = 106/186 (56.99%), Postives = 128/186 (68.82%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + DFF GKE  K  NPDE           +L+G+    V D+LLLDVTP SLG+ET GGVMT LI +NTTIP KK QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDANGI+NVSA+DK  G++ +I I    G LS +E+E+MV++AE
Sbjct:  340 GGQTRMPLVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLAGD----VTDVLLLDVTPLSLGIETMGGVMTSLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLEGINPAPRGMPQIEVTFDIDANGIINVSAKDKNTGKEQQIKIQASSG-LSDEEVEQMVRDAE 519          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_GRATL (Chaperone protein dnaK OS=Gracilaria tenuistipitata var. liui GN=dnaK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.669e-48
Identity = 104/186 (55.91%), Postives = 128/186 (68.82%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIP +QQL++    GK+  +S NPDE           +L+GE    V+D+LLLDVTP SLG+ET GGVMT +I RNTT+P KK ++FST  DNQP V I V +GER  T+DN  LG F L GI PAPRGVPQI V FDIDANGIL+V A+DK  G++  ITI      L K+E+EK+V+EAE
Sbjct:  336 GGSTRIPAIQQLVKKMI-GKDPNQSVNPDEVVAIGAAVQAGVLAGE----VKDILLLDVTPLSLGVETLGGVMTKIIDRNTTVPTKKSEIFSTAVDNQPNVEIHVLQGEREFTKDNKSLGTFRLDGIMPAPRGVPQIEVIFDIDANGILSVKAKDKGTGKEQSITITG-ASTLPKEEVEKLVKEAE 515          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_GEOMG (Chaperone protein dnaK OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dnaK PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.669e-48
Identity = 106/186 (56.99%), Postives = 127/186 (68.28%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ +Q+ F GK   K  NPDE           +L G+    V+D+LLLDVTP SLG+ET G VMT LI +NTTIP +K QVFST  DNQP V I V +GER    DN  LG FEL+GIPPAPRGVPQI V FDIDANGI++VSA+D   G++  I I    G LSK+EI+KMV+EAE
Sbjct:  336 GGMTRMPAVQKRVQEIF-GKAPNKGVNPDEVVAIGAGIQGGVLRGD----VKDVLLLDVTPLSLGIETLGSVMTKLIDKNTTIPCRKSQVFSTASDNQPAVTIHVLQGEREMASDNKTLGNFELTGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQSIRITASSG-LSKEEIDKMVREAE 515          
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_WOLWR4.669e-4856.99Chaperone protein dnaK OS=Wolbachia sp. subsp. Dro... [more]
DNAK_SYNAS4.669e-4855.38Chaperone protein dnaK OS=Syntrophus aciditrophicu... [more]
DNAK_STRCO4.669e-4853.23Chaperone protein dnaK OS=Streptomyces coelicolor ... [more]
DNAK_RHOMR4.669e-4856.76Chaperone protein dnaK OS=Rhodothermus marinus GN=... [more]
DNAK_PSEFS4.669e-4856.45Chaperone protein dnaK OS=Pseudomonas fluorescens ... [more]
DNAK_PARDP4.669e-4856.45Chaperone protein dnaK OS=Paracoccus denitrificans... [more]
DNAK_KLEP34.669e-4856.99Chaperone protein dnaK OS=Klebsiella pneumoniae (s... [more]
DNAK_HAEDU4.669e-4856.99Chaperone protein dnaK OS=Haemophilus ducreyi GN=d... [more]
DNAK_GRATL4.669e-4855.91Chaperone protein dnaK OS=Gracilaria tenuistipitat... [more]
DNAK_GEOMG4.669e-4856.99Chaperone protein dnaK OS=Geobacter metallireducen... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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