CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11598 contig Csv1_Contig11598:259..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_PECCP (Chaperone protein dnaK OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 7.965e-48
Identity = 106/186 (56.99%), Postives = 129/186 (69.35%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + DFF GKE  K  NPDE           +LSG+    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V I V +GER R  DN  LG+F L GI  APRG+PQI V FDIDA+GIL+VSA+DK  G++ KITI    G L+++EI+KMV++AE
Sbjct:  341 GGQTRMPLVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGD----VKDVLLLDVTPLSLGIETMGGVMTALIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAHDNKSLGQFNLDGIQAAPRGMPQIEVTFDIDADGILHVSAKDKNSGREQKITIKASSG-LNEEEIQKMVRDAE 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_DESDG (Chaperone protein dnaK OS=Desulfovibrio desulfuricans (strain G20) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 7.965e-48
Identity = 106/186 (56.99%), Postives = 128/186 (68.82%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + DFF GKE  +S NPDE           IL+G+    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP KK Q F+T  DNQP V I V +GER    DN  LG+FEL+GIP APRG+PQI V FDIDANGI+NVSA+D   G++  I I    G LS+DEI+ +V+EAE
Sbjct:  335 GGMTRMPLVQKKVADFF-GKEPNRSMNPDEVVSMGAAIQGGILAGD----VKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFTTAADNQPSVSIHVMQGERPMASDNMTLGRFELTGIPAAPRGMPQIEVSFDIDANGIVNVSAKDLGTGKEQSIRITASSG-LSEDEIQNLVKEAE 514          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP75_KLUMA (Heat shock protein SSB OS=Kluyveromyces marxianus GN=SSB PE=3 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.040e-47
Identity = 97/187 (51.87%), Postives = 130/187 (69.52%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEG-NEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+LL DFF+GK+L KS NPDE          AIL+G+  +++ +DLLLLDV P SLG+  AG V  V++PRNTT+P  K + F+T  D+Q  V   VY+GER   ++N LLG+F+L G+PP P G P +   F++DANGIL V+A +K+ G+   ITI+N  GRLS +EIE+MV +AE
Sbjct:  341 GGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGAAVQGAILTGQSTSDETKDLLLLDVAPLSLGVGMAGDVFGVVVPRNTTVPTIKRRTFTTVADHQTTVTFPVYQGERVNCKENTLLGEFDLKGVPPMPAGEPVLEAIFEVDANGILKVTAVEKSTGKSANITISNAIGRLSSEEIEQMVNQAE 527          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_THISH (Chaperone protein dnaK OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.040e-47
Identity = 104/186 (55.91%), Postives = 127/186 (68.28%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ  +++FF GKE  K  NPDE           +L GE    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V + V +GER     N  LG+F+L+ IPPAPRGVPQ+ V FDIDANGILNVSA+DK  G++  I I    G LS +E+E+MV++AE
Sbjct:  341 GGQTRMPKVQDAVKNFF-GKEPRKDVNPDEAVAVGAAIQAGVLGGE----VKDVLLLDVTPLSLGIETLGGVMTKLIEKNTTIPTKATQVFSTADDNQTAVTVHVLQGEREMASANKSLGRFDLTDIPPAPRGVPQVEVMFDIDANGILNVSAKDKATGKQQSIVIKASSG-LSDEEVERMVRDAE 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_TERTT (Chaperone protein dnaK OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.040e-47
Identity = 106/186 (56.99%), Postives = 128/186 (68.82%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQQ + +FF GKE  K  NPDE          A+LSG+    V+D+LLLDVTP +LG+ET GGV T LI +NTTIP KK QVFST  DNQ  V I V +GER +   N  LG+F+L+ IPPAPRG+PQ+ V FDIDANGILNVSA+DK  G++  I I    G LS DEIE MV++AE
Sbjct:  341 GGQTRMPLVQQKVAEFF-GKEPRKDVNPDEAVAMGAAIQGAVLSGD----VKDVLLLDVTPLTLGIETMGGVATPLIEKNTTIPTKKSQVFSTAEDNQTAVTIHVVQGERKQAAQNKSLGRFDLADIPPAPRGMPQVEVTFDIDANGILNVSAKDKATGKEQSIVIKASSG-LSDDEIENMVKDAE 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_SODGM (Chaperone protein dnaK OS=Sodalis glossinidius (strain morsitans) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.040e-47
Identity = 107/186 (57.53%), Postives = 129/186 (69.35%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + DFF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V I V +GER R+ DN  LG+F L GI PA RG PQI V FDIDA+GIL+VSA+DK  G++ KITI    G L+++EI+KMVQEAE
Sbjct:  341 GGQTRMPLVQKKVTDFF-GKEPRKDVNPDEAVAIGAAVQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVMTPLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRSGDNKSLGQFNLDGISPAMRGTPQIEVTFDIDADGILHVSAKDKNSGREQKITIKASSG-LNEEEIQKMVQEAE 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_SILST (Chaperone protein dnaK OS=Silicibacter sp. (strain TM1040) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.040e-47
Identity = 105/186 (56.45%), Postives = 129/186 (69.35%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKV + +  FF GKE  K  NPDE           +L G+    V+D++LLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER    DN +LG+F L  IPPAPRG+PQI V FDIDANGI++VSA+DK  G++ KITI    G LS ++IEKMV++AE
Sbjct:  337 GGMTRMPKVIEEVTKFF-GKEPHKGVNPDEVVAMGAAIQAGVLQGD----VKDVVLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKMLGQFNLEDIPPAPRGMPQIEVTFDIDANGIVSVSAKDKGTGKEQKITI-QASGGLSDEDIEKMVKDAE 516          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSL (Chaperone protein dnaK OS=Geobacter sulfurreducens GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.040e-47
Identity = 106/186 (56.99%), Postives = 127/186 (68.28%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ +Q+ F GK   K  NPDE           +L G+    V+D+LLLDVTP SLG+ET G VMT LI +NTTIP +K QVFST  DNQP V I V +GER    DN  LG FEL+GIPPAPRGVPQI V FDIDANGI++VSA+D   G++  I I    G LSK+EI+KMV+EAE
Sbjct:  336 GGMTRMPAVQKRVQEIF-GKVPNKGVNPDEVVAIGAAIQGGVLRGD----VKDVLLLDVTPLSLGIETLGSVMTKLIEKNTTIPCRKSQVFSTASDNQPAVTIHVLQGEREMAIDNKTLGNFELTGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQSIRITASSG-LSKEEIDKMVKEAE 515          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_GEOLS (Chaperone protein dnaK OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.040e-47
Identity = 105/186 (56.45%), Postives = 127/186 (68.28%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V Q +Q+ F GK   K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGV+T LI +NTTIP +K Q FST  DNQP V I V +GER   RDN  LG FEL+GIPPAPRGVPQI V FDIDANGI++VSA+D   G++  I I    G LSK+EI+KMV++AE
Sbjct:  336 GGMTRMPAVVQRVQEIF-GKVPNKGVNPDEVVAIGAGIQGGVLKGD----VKDVLLLDVTPLSLGIETLGGVLTRLIEKNTTIPCRKSQTFSTAADNQPAVSIHVLQGEREMARDNKTLGNFELTGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQSIRITASSG-LSKEEIDKMVKDAE 515          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_CAUSK (Chaperone protein dnaK OS=Caulobacter sp. (strain K31) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.040e-47
Identity = 103/186 (55.38%), Postives = 127/186 (68.28%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG +R+PKVQQ +QDFF G+E  K  NPDE           +L G+    V+D+LLLDVTP +LG+ET GGV T LI RNTTIP K+ Q FST  DNQ  V I+ ++GER    DN  LG+F+L GIPPAPRGVPQI V FDIDANGI+NV A+DK   +++ I I    G LS  +IE+MV+EAE
Sbjct:  336 GGMSRMPKVQQAVQDFF-GREPHKGVNPDEVVALGAAVQAGVLQGD----VKDVLLLDVTPLTLGIETLGGVFTPLIERNTTIPTKRSQTFSTADDNQSAVTIRAFQGERPMAVDNKFLGQFDLQGIPPAPRGVPQIEVTFDIDANGIVNVHAKDKATNKEHSIRI-QANGGLSDADIERMVKEAE 515          
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PECCP7.965e-4856.99Chaperone protein dnaK OS=Pectobacterium carotovor... [more]
DNAK_DESDG7.965e-4856.99Chaperone protein dnaK OS=Desulfovibrio desulfuric... [more]
HSP75_KLUMA1.040e-4751.87Heat shock protein SSB OS=Kluyveromyces marxianus ... [more]
DNAK_THISH1.040e-4755.91Chaperone protein dnaK OS=Thioalkalivibrio sp. (st... [more]
DNAK_TERTT1.040e-4756.99Chaperone protein dnaK OS=Teredinibacter turnerae ... [more]
DNAK_SODGM1.040e-4757.53Chaperone protein dnaK OS=Sodalis glossinidius (st... [more]
DNAK_SILST1.040e-4756.45Chaperone protein dnaK OS=Silicibacter sp. (strain... [more]
DNAK_GEOSL1.040e-4756.99Chaperone protein dnaK OS=Geobacter sulfurreducens... [more]
DNAK_GEOLS1.040e-4756.45Chaperone protein dnaK OS=Geobacter lovleyi (strai... [more]
DNAK_CAUSK1.040e-4755.38Chaperone protein dnaK OS=Caulobacter sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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