CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11598 contig Csv1_Contig11598:259..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_ARTCA (Chaperone protein dnaK OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.040e-47
Identity = 100/186 (53.76%), Postives = 129/186 (69.35%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V +L+++   GKE  K  NPDE           +L GE     +D+LL+DVTP SLG+ET GGVMT LI RNT IP K+ + F+T  DNQP V IQV++GER  TRDN  LG FEL+GI PAPRGVPQ+ V FDIDANGI++VSA+DK  G++  +TI      LSK++I++MV++AE
Sbjct:  317 GGSTRMPAVSELVKELAGGKEPNKGVNPDEVVAVGAALQAGVLKGER----KDVLLIDVTPLSLGIETKGGVMTHLIERNTAIPTKRSETFTTADDNQPSVAIQVFQGEREFTRDNKPLGTFELTGIAPAPRGVPQVEVTFDIDANGIVHVSAKDKGTGKEQSMTITGGTA-LSKEDIDRMVKDAE 497
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_ACTPJ (Chaperone protein dnaK OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.040e-47
Identity = 105/186 (56.45%), Postives = 128/186 (68.82%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQQ + +FF GKE  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGVMTVLI +NTTIP KK QVFST  DNQ  V I V +GER +   N  LG+F L GI PAPRG+PQI V FDIDANG++NVSA+DK  G++ +I I    G LS +EIE+MV++AE
Sbjct:  340 GGQTRMPLVQQKVAEFF-GKEARKDVNPDEAVAIGAAVQGGVLKGD----VKDVLLLDVTPLSLGIETMGGVMTVLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKQASANKSLGQFNLEGINPAPRGMPQIEVTFDIDANGVINVSAKDKNTGKEQQIRIQASSG-LSDEEIEQMVRDAE 519
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_ACTP2 (Chaperone protein dnaK OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.040e-47
Identity = 105/186 (56.45%), Postives = 128/186 (68.82%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQQ + +FF GKE  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGVMTVLI +NTTIP KK QVFST  DNQ  V I V +GER +   N  LG+F L GI PAPRG+PQI V FDIDANG++NVSA+DK  G++ +I I    G LS +EIE+MV++AE
Sbjct:  340 GGQTRMPLVQQKVAEFF-GKEARKDVNPDEAVAIGAAVQGGVLKGD----VKDVLLLDVTPLSLGIETMGGVMTVLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKQASANKSLGQFNLEGINPAPRGMPQIEVTFDIDANGVINVSAKDKNTGKEQQIRIQASSG-LSDEEIEQMVRDAE 519
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP75_KLULA (Heat shock protein SSB OS=Kluyveromyces lactis GN=SSB PE=3 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 97/187 (51.87%), Postives = 129/187 (68.98%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEG-NEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+LL DFF GK+L KS NPDE          AIL+G+  +++ +DLLLLDV P SLG+  AG V  V++PRNTT+P  K + F+T  D+Q  V   VY+GER   ++N LLG+F+L G+PP P G P +   F++DANGIL V+A +K+ G+   ITI+N  GRLS +EIE+MV +AE
Sbjct:  341 GGSTRIPKVQKLLSDFFEGKQLEKSINPDEAVAYGAAVQGAILTGQSTSDETKDLLLLDVAPLSLGVGMAGDVFGVVVPRNTTVPTIKRRTFTTVADHQTTVTFPVYQGERVNCKENTLLGEFDLKGVPPMPAGEPVLEAIFEVDANGILKVTAVEKSTGKSANITISNAIGRLSSEEIEQMVNQAE 527
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_SALTY (Chaperone protein dnaK OS=Salmonella typhimurium GN=dnaK PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 105/186 (56.45%), Postives = 130/186 (69.89%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + +FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GIL+VSA+DK  G++ KITI    G L+++EI+KMV++AE
Sbjct:  341 GGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEEEIQKMVRDAE 520
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_SALTI (Chaperone protein dnaK OS=Salmonella typhi GN=dnaK PE=2 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 105/186 (56.45%), Postives = 130/186 (69.89%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + +FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GIL+VSA+DK  G++ KITI    G L+++EI+KMV++AE
Sbjct:  341 GGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEEEIQKMVRDAE 520
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_SALSV (Chaperone protein dnaK OS=Salmonella schwarzengrund (strain CVM19633) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 105/186 (56.45%), Postives = 130/186 (69.89%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + +FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GIL+VSA+DK  G++ KITI    G L+++EI+KMV++AE
Sbjct:  341 GGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEEEIQKMVRDAE 520
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_SALPK (Chaperone protein dnaK OS=Salmonella paratyphi A (strain AKU_12601) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 105/186 (56.45%), Postives = 130/186 (69.89%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + +FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GIL+VSA+DK  G++ KITI    G L+++EI+KMV++AE
Sbjct:  341 GGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEEEIQKMVRDAE 520
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_SALPC (Chaperone protein dnaK OS=Salmonella paratyphi C (strain RKS4594) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 105/186 (56.45%), Postives = 130/186 (69.89%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + +FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GIL+VSA+DK  G++ KITI    G L+++EI+KMV++AE
Sbjct:  341 GGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEEEIQKMVRDAE 520
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_SALPB (Chaperone protein dnaK OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 105/186 (56.45%), Postives = 130/186 (69.89%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + +FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GIL+VSA+DK  G++ KITI    G L+++EI+KMV++AE
Sbjct:  341 GGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEEEIQKMVRDAE 520
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_ARTCA1.040e-4753.76Chaperone protein dnaK OS=Arthrobacter chloropheno... [more]
DNAK_ACTPJ1.040e-4756.45Chaperone protein dnaK OS=Actinobacillus pleuropne... [more]
DNAK_ACTP21.040e-4756.45Chaperone protein dnaK OS=Actinobacillus pleuropne... [more]
HSP75_KLULA1.359e-4751.87Heat shock protein SSB OS=Kluyveromyces lactis GN=... [more]
DNAK_SALTY1.359e-4756.45Chaperone protein dnaK OS=Salmonella typhimurium G... [more]
DNAK_SALTI1.359e-4756.45Chaperone protein dnaK OS=Salmonella typhi GN=dnaK... [more]
DNAK_SALSV1.359e-4756.45Chaperone protein dnaK OS=Salmonella schwarzengrun... [more]
DNAK_SALPK1.359e-4756.45Chaperone protein dnaK OS=Salmonella paratyphi A (... [more]
DNAK_SALPC1.359e-4756.45Chaperone protein dnaK OS=Salmonella paratyphi C (... [more]
DNAK_SALPB1.359e-4756.45Chaperone protein dnaK OS=Salmonella paratyphi B (... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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