CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11598 contig Csv1_Contig11598:259..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_PSEPW (Chaperone protein dnaK OS=Pseudomonas putida (strain W619) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 106/186 (56.99%), Postives = 129/186 (69.35%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + DFF GKE  K  NPDE          A+L+G+    V+D+LLLDV+P +LG+ET GGVMT LI +NTTIP KK QVFST  DNQ  V I V +GER +   N  LGKF+L+ IPPAPRGVPQI V FDIDANGIL+V A+DK  G+   I I  + G LS +EIEKMV++AE
Sbjct:  341 GGQTRMPLVQKAVADFF-GKEARKDVNPDEAVAMGAAIQGAVLAGD----VKDVLLLDVSPLTLGIETMGGVMTPLIEKNTTIPTKKSQVFSTADDNQGAVTIHVLQGERKQASQNKSLGKFDLADIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKTQSIVIKANSG-LSDEEIEKMVRDAE 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_METSS (Chaperone protein dnaK OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 105/185 (56.76%), Postives = 130/185 (70.27%), Query Frame = -1
Query:   31 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEA 585
            GG TR+PKVQ+ +++FF GKE  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V IQV +GER     N  LG+F LS IPPAPRG+PQI V FDIDAN IL+VSA+DK  G++NKITI  + G LS++EI++M ++A
Sbjct:  341 GGQTRMPKVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLQGD----VKDVLLLDVTPLSLGIETLGGVMTKLIKKNTTIPTKASQVFSTAEDNQNAVTIQVLQGEREMAAGNKSLGQFNLSDIPPAPRGMPQIEVTFDIDANAILHVSAKDKATGKENKITIKANSG-LSEEEIKRMEEDA 519          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_METFK (Chaperone protein dnaK OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 105/185 (56.76%), Postives = 129/185 (69.73%), Query Frame = -1
Query:   31 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEA 585
            GG TR+PKVQ+ +++FF GKE  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGVMT LI +NTTIP K  QVFST  DNQ  V I V +GER     N  LG+F L+ IPPAPRG+PQI V FDIDANGIL+VSA+DK  G++NKITI  + G LS +EI++M +EA
Sbjct:  341 GGQTRMPKVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLQGD----VKDVLLLDVTPLSLGIETLGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGEREMASGNKSLGQFNLTDIPPAPRGMPQIEVTFDIDANGILHVSAKDKATGKENKITIKANSG-LSDEEIKRMEEEA 519          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_ARTS2 (Chaperone protein dnaK OS=Arthrobacter sp. (strain FB24) GN=dnaK PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 100/186 (53.76%), Postives = 129/186 (69.35%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V +L+++   GKE  K  NPDE           +L GE     +D+LL+DVTP SLG+ET GGVMT LI RNT IP K+ + F+T  DNQP V IQV++GER  TRDN  LG FEL+GI PAPRGVPQ+ V FDIDANGI++VSA+DK  G++  +TI      LSK++I++MV++AE
Sbjct:  317 GGSTRMPAVYELVKELAGGKEPNKGVNPDEVVAVGAALQAGVLKGER----KDVLLIDVTPLSLGIETKGGVMTHLIERNTAIPTKRSETFTTADDNQPSVAIQVFQGEREFTRDNKPLGTFELTGIAPAPRGVPQVEVTFDIDANGIVHVSAKDKGTGKEQSMTITGGTA-LSKEDIDRMVKDAE 497          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK2_THEEB (Chaperone protein dnaK2 OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 104/186 (55.91%), Postives = 126/186 (67.74%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIP +Q+L++    GK+  +S NPDE           +L+GE    V+D+LLLDVTP SLG+ET GGVMT +IPRNTTIP KK +VFST  D Q  V I V +GER    DN  LG F L GIPPAPRGVPQI V FDIDANGILNV+A DK  G++  I+I      L K+E+E+MV+EAE
Sbjct:  335 GGSTRIPAIQELVKRLL-GKDPNQSVNPDEVVAVGAAIQAGVLAGE----VKDILLLDVTPLSLGVETLGGVMTKIIPRNTTIPTKKSEVFSTAVDGQTNVEIHVLQGEREMAADNKSLGTFRLDGIPPAPRGVPQIEVTFDIDANGILNVTARDKGTGKQQSISITG-ASTLPKEEVERMVREAE 514          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK1_STRAW (Chaperone protein dnaK1 OS=Streptomyces avermitilis GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.359e-47
Identity = 98/186 (52.69%), Postives = 128/186 (68.82%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V +L+++   G++  K  NPDE           +L GE    V+D+LLLDVTP SLG+ET GG+MT LI RNTTIP K+ ++F+T  DNQP V IQVY+GER     N  LG FEL+G+PPAPRGVPQI V FDIDANGI++V+A+D   G++ K+T+      L KDE+++M QEAE
Sbjct:  311 GGSTRMPAVAELVKELTGGQDANKGVNPDEVVAIGAALQAGVLKGE----VKDVLLLDVTPLSLGIETKGGIMTKLIERNTTIPTKRSEIFTTAEDNQPSVQIQVYQGEREIAAYNKKLGMFELTGLPPAPRGVPQIEVAFDIDANGIMHVTAKDLGTGKEQKMTVTGGSS-LPKDEVDRMRQEAE 491          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP73_PLAFA (Heat shock 70 kDa protein PPF203 (Fragment) OS=Plasmodium falciparum PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.774e-47
Identity = 92/120 (76.67%), Postives = 104/120 (86.67%), Query Frame = -1
Query:   28 ETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 387
            ETAGGVMT LI RNTTIP KK Q+F+TY DNQPGVLIQVYEGER  T+DNNLLGKF+L GIPPAPR VPQI V FDIDANGILNV+A DK  G++N+ITI NDKGRLSKD+I++MV +AE
Sbjct:    4 ETAGGVMTKLIERNTTIPTKKNQIFTTYADNQPGVLIQVYEGERAMTKDNNLLGKFQLEGIPPAPRSVPQIEVTFDIDANGILNVTALDKGTGKQNQITITNDKGRLSKDDIDRMVNDAE 123          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPM (Chaperone protein dnaK OS=Wolbachia pipientis wMel GN=dnaK PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.774e-47
Identity = 105/186 (56.45%), Postives = 128/186 (68.82%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKV + +++FF GK+  +  NPDE           I+ G+    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER    DN LLG+F L GIPPAPRG PQI V FDIDANGI +VSA+DK  G++ KI I    G LS +EI +MV+EAE
Sbjct:  335 GGMTRMPKVIEKVKEFF-GKDPHRGVNPDEVVAIGAAIQAGIIQGD----VRDVLLLDVTPLSLGIETLGGVFTPLIERNTTIPTKKSQVFSTAEDNQTAVTIKVHQGERKLAVDNKLLGQFSLEGIPPAPRGRPQIEVTFDIDANGIAHVSAKDKATGKEQKIRI-QSSGGLSDNEINRMVKEAE 514          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_PSEU2 (Chaperone protein dnaK OS=Pseudomonas syringae pv. syringae (strain B728a) GN=dnaK PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.774e-47
Identity = 104/186 (55.91%), Postives = 132/186 (70.97%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+L+ +FF GKE  K  NPDE          A+L+G+    V+D+LLLDV+P +LG+ET GGVMT LI +NTTIP KK QVFST  DNQ  V I V +GER +   N  LGKF+L+ IPPAPRGVPQI V FDIDANGIL+V A+DK  G++  I I  + G LS++EI++MV++AE
Sbjct:  341 GGQTRMPLVQKLVTEFF-GKEARKDVNPDEAVAMGAAIQGAVLAGD----VKDVLLLDVSPLTLGIETMGGVMTALIEKNTTIPTKKSQVFSTADDNQNAVTIHVLQGERKQAAQNKSLGKFDLAEIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKQQSIVIKANSG-LSEEEIQQMVRDAE 520          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_PSEPG (Chaperone protein dnaK OS=Pseudomonas putida (strain GB-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.774e-47
Identity = 105/186 (56.45%), Postives = 129/186 (69.35%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ + DFF GKE  K  NPDE          A+L+G+    V+D+LLLDV+P +LG+ET GGVMT LI +NTTIP KK QVFST  DNQ  V I V +GER +   N  LGKF+L+ IPPAPRGVPQI V FDIDANGIL+V A+DK  G+   I I  + G LS +EIE+MV++AE
Sbjct:  341 GGQTRMPLVQKTVADFF-GKEARKDVNPDEAVAMGAAIQGAVLAGD----VKDVLLLDVSPLTLGIETMGGVMTALIEKNTTIPTKKSQVFSTADDNQGAVTIHVLQGERKQAAQNKSLGKFDLADIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKAQSIVIKANSG-LSDEEIERMVRDAE 520          
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PSEPW1.359e-4756.99Chaperone protein dnaK OS=Pseudomonas putida (stra... [more]
DNAK_METSS1.359e-4756.76Chaperone protein dnaK OS=Methylovorus sp. (strain... [more]
DNAK_METFK1.359e-4756.76Chaperone protein dnaK OS=Methylobacillus flagella... [more]
DNAK_ARTS21.359e-4753.76Chaperone protein dnaK OS=Arthrobacter sp. (strain... [more]
DNAK2_THEEB1.359e-4755.91Chaperone protein dnaK2 OS=Thermosynechococcus elo... [more]
DNAK1_STRAW1.359e-4752.69Chaperone protein dnaK1 OS=Streptomyces avermitili... [more]
HSP73_PLAFA1.774e-4776.67Heat shock 70 kDa protein PPF203 (Fragment) OS=Pla... [more]
DNAK_WOLPM1.774e-4756.45Chaperone protein dnaK OS=Wolbachia pipientis wMel... [more]
DNAK_PSEU21.774e-4755.91Chaperone protein dnaK OS=Pseudomonas syringae pv.... [more]
DNAK_PSEPG1.774e-4756.45Chaperone protein dnaK OS=Pseudomonas putida (stra... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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