CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11598 contig Csv1_Contig11598:259..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 6.486e-66
Identity = 134/186 (72.04%), Postives = 150/186 (80.65%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNGKEL KS NPDE          AILSG+ +E VQDLLLLDVTP SLG+ETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVL QVYE     T+DNNLLGKFEL+GIPPA    PQI V FDIDANGI+NVSA DK+ G++NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  338 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLNQVYE-VGAMTKDNNLLGKFELTGIPPA-LWCPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAE 521          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 8.470e-66
Identity = 127/187 (67.91%), Postives = 148/187 (79.14%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEK-VQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIP++Q+L+ DFFNGKE  KS NPDE          AILSG+   K   ++LLLDV P S+G+ETAGGVMT LI RNTTIP KK + FST+ DNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQI V FD+DANGI+NVSA +K  G+ NKI I NDKGRLSK+EIE+M+ EAE
Sbjct:  336 GGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDTTSKSTNEILLLDVAPLSVGIETAGGVMTPLIKRNTTIPTKKSETFSTFADNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDVDANGIMNVSALEKGTGKTNKIVITNDKGRLSKEEIERMLAEAE 522          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 8.470e-66
Identity = 129/187 (68.98%), Postives = 149/187 (79.68%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEK-VQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+L+ DFFN K+  KS NPDE          AILSG+ + K   ++LLLDV P SLG+ETAGGVMT LI RNTTIP KK + FSTY DNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQI V FD+DANGI+NVSA +K  G+ NKITI NDKGRLSK+EIE+M+ EAE
Sbjct:  206 GGSTRIPKIQKLVSDFFN-KDANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDLDANGIMNVSASEKGTGKSNKITITNDKGRLSKEEIERMLAEAE 391          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.465e-65
Identity = 124/186 (66.67%), Postives = 146/186 (78.49%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQL+Q+ FNGKEL KS NPDE          AILSG+ + ++ +L+ +DV P SLG+ET GGVMT ++PRNT IP KK Q FST+ DNQ GVLIQVYEGERT T+DNNLLGKFEL+GIPPAPRG PQI V FD+D+NGILNV+AEDKT  +  KITI NDKGRLS  +I KMV++AE
Sbjct:  339 GGSTRIPKVQQLIQNLFNGKELNKSINPDEAVAYGAAVQAAILSGDKSSRISELIFIDVAPLSLGIETVGGVMTNIVPRNTIIPCKKTQTFSTHTDNQSGVLIQVYEGERTMTKDNNLLGKFELTGIPPAPRGTPQIEVSFDVDSNGILNVTAEDKTTKKVEKITITNDKGRLSLKDITKMVEDAE 524          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 9.365e-65
Identity = 126/187 (67.38%), Postives = 149/187 (79.68%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEK-VQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+L+ D+FN KE  KS NPDE          AILSG+ + K   ++LLLDV P S+G+ETAGGVMT L+ RNTTIP KK + FSTY DNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAPRGVPQI V FD+DANGI+NVSA +K  G+ NKITI NDKGRLSK++IE+M+ +AE
Sbjct:  336 GGSTRIPKIQRLVSDYFN-KEANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSVGIETAGGVMTPLVKRNTTIPTKKSETFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDLDANGIMNVSAVEKGTGKTNKITITNDKGRLSKEDIERMLADAE 521          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7X_PIG (Heat shock 70 kDa protein (Fragment) OS=Sus scrofa PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.086e-64
Identity = 127/186 (68.28%), Postives = 147/186 (79.03%), Query Frame = -1
Query:   31 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYF-DNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEA 585
            GG TRIPK+Q+LLQDFFNG+EL KS NPDE          A+L G+  EKVQDLLLLDV P SLGLETAGGVMT LI RN TIP K+ Q F     +NQPGVLIQVYEGER  TRDNNLLG+FELS IPP PRGVPQI V FDIDANGIL+V+A D++ G+ NK+T+ +DKGRLSK+E+E+MV+EA
Sbjct:   78 GGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAVLMGDKCEKVQDLLLLDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQNFHYLLQNNQPGVLIQVYEGERAMTRDNNLLGRFELSRIPPTPRGVPQIEVTFDIDANGILSVTATDRSTGRANKMTLTSDKGRLSKEEVERMVREA 263          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_LUPPO (Heat shock 70 kDa protein (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 2.725e-64
Identity = 123/137 (89.78%), Postives = 127/137 (92.70%), Query Frame = -1
Query:   28 KVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 438
            KVQDLLLLDVTP SLGLETAGGVMTVLIPRNTTIP KKEQVFSTY D +PGVLIQV+EGERTRTRDNNLLGKFELSGIPPAPR VPQITVCFDIDAN  LNVSAEDKT GQKNKITI NDKGRLSK++IEKMVQE E
Sbjct:    1 KVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDKEPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAPRDVPQITVCFDIDANWCLNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEVE 137          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.559e-64
Identity = 123/186 (66.13%), Postives = 149/186 (80.11%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ LLQ+FF GK L  S NPDE          AILSG+ ++K+QD+LL+DV P SLG+ETAGGVMT LI RN+ IP K+ Q+FSTY DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRGVPQI V FD+DANGILNV+A++K+ G++  ITI NDKGRLS+ +I++MV EAE
Sbjct:  337 GGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTQIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEVTFDLDANGILNVAAKEKSTGKEKNITIKNDKGRLSQADIDRMVSEAE 522          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.559e-64
Identity = 123/186 (66.13%), Postives = 149/186 (80.11%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ LLQ+FF GK L  S NPDE          AILSG+ ++K+QD+LL+DV P SLG+ETAGGVMT LI RN+ IP K+ ++FSTY DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRGVPQI V FD+DANGILNV+A+DK+ G++  ITI NDKGRLS+ +I++MV EAE
Sbjct:  337 GGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEVTFDLDANGILNVAAKDKSSGKEKNITIKNDKGRLSQADIDRMVSEAE 522          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.559e-64
Identity = 123/186 (66.13%), Postives = 149/186 (80.11%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ LLQ+FF GK L  S NPDE          AILSG+ ++K+QD+LL+DV P SLG+ETAGGVMT LI RN+ IP K+ ++FSTY DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRGVPQI V FD+DANGILNV+A+DK+ G++  ITI NDKGRLS+ +I++MV EAE
Sbjct:  337 GGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEVTFDLDANGILNVAAKDKSSGKEKNITIKNDKGRLSQADIDRMVSEAE 522          
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_ORYLA6.486e-6672.04Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP72_PARBA8.470e-6667.91Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP70_PENCI8.470e-6668.98Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HS7C3_DICDI2.465e-6566.67Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP70_EMENI9.365e-6567.38Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP7X_PIG2.086e-6468.28Heat shock 70 kDa protein (Fragment) OS=Sus scrofa... [more]
HSP70_LUPPO2.725e-6489.78Heat shock 70 kDa protein (Fragment) OS=Lupinus po... [more]
HSP74_ANOAL3.559e-6466.13Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP72_ANOAL3.559e-6466.13Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL3.559e-6466.13Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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