CB304801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADS_PONAB (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADS PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 76/174 (43.68%), Postives = 104/174 (59.77%), Query Frame = -3 Query: 176 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 697 GS T L+FE+C +P +++LG+ G G + M LD+ R+ +A+ LGI Q +D + Y R FG PL + Q IQ K ADM AL+S+R + A DN K K+ A L A+E AT ++ QAIQ LGG GYV E R RDA++ EI GTSEI+R++I LL+ Sbjct: 235 GSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKDNKKPFIKEAAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLR 408
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADS_HUMAN (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADS PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 76/174 (43.68%), Postives = 104/174 (59.77%), Query Frame = -3 Query: 176 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 697 GS T L+FE+C +P +++LG+ G G + M LD+ R+ +A+ LGI Q +D + Y R FG PL + Q IQ K ADM AL+S+R + A DN K K+ A L A+E AT ++ QAIQ LGG GYV E R RDA++ EI GTSEI+R++I LL+ Sbjct: 235 GSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKDNKKPFIKEAAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLR 408
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADS_MOUSE (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acads PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.468e-31 Identity = 77/173 (44.51%), Postives = 103/173 (59.54%), Query Frame = -3 Query: 176 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 694 S T L+FE+C +P EN+LG+ G G + M LD+ R+ +A+ LGI QA +D + Y R FG PL + Q IQ K ADM AL+S+R + A DN K K+ A L A+E AT ++ QAIQ LG GYV E R RDA++ EI GTSEI+R++I LL+ Sbjct: 236 SSTANLIFEDCRIPKENLLGEPGMGFKIAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRNAFGAPLTKLQNIQFKLADMALALESARLLTWRAAMLKDNKKPFTKESAMRKLAASEAATAISHQAIQILGSMGYVTEMPAERYYRDARITEIYEGTSEIQRLVIAGHLLR 408
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDB_BACSU (Acyl-CoA dehydrogenase OS=Bacillus subtilis GN=mmgC PE=2 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 4.272e-31 Identity = 73/173 (42.20%), Postives = 109/173 (63.01%), Query Frame = -3 Query: 179 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLL 697 GS+T EL+F+N VP N+LG+EG G ++ M+ L++ R+ +AA LGI +A ++ + Y +QR QFGRP+ Q I K ADM T +++R VY A + G K+ + A++ A + AL A+Q GG GY+ +Y RLLRDAK+ +I GT+EI+R+II + LL Sbjct: 204 GSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLNVGRIGIAAQALGIAEAALEHAVDYAKQRVQFGRPIAANQGISFKLADMATRAEAARHLVYHAADLHNRGLNCGKEASMAKQFASDAAVKAALDAVQIYGGYGYMKDYPVERLLRDAKVTQIYEGTNEIQRLIISKYLL 376
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADS_PIG (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADS PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.287e-31 Identity = 80/175 (45.71%), Postives = 105/175 (60.00%), Query Frame = -3 Query: 176 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDP--KDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 694 S T L+FE+C +P EN+LG+ G G + M LD+ R+ +A+ LGI QA +D + Y R FG PL + Q IQ K ADM AL+S+R + A DN K +P K+ A L A+E AT + QAIQ LGG GYV E R RDA++ EI GTSEI+R++I LLK Sbjct: 236 SSTANLIFEDCRIPKENLLGEPGMGFKIAMKTLDMGRIGIASKALGISQAALDCAVNYAENRRAFGVPLTKLQGIQFKLADMALALESARLLTWRAAMLKDN-KKNPFIKEPAMAKLAASEAATAITHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLK 409
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADS_BOVIN (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADS PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.052e-29 Identity = 74/173 (42.77%), Postives = 101/173 (58.38%), Query Frame = -3 Query: 176 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 694 S T L+FE+ +P +++LG+ G G + M LD R+ +A+ LGI QA +D + Y R FG PL + Q IQ K ADM AL+S+R + A DN K K+ A L A+E AT + QA+Q LGG GYV E R RDA++ EI GTSEI+R+++ LLK Sbjct: 236 SSTANLIFEDRRIPKDSLLGEPGLGFKIAMQTLDTGRIGIASQALGIAQAALDCAVTYAENRSAFGAPLTKLQAIQFKLADMALALESARLLTWRAAMLKDNKKPFTKEAAMAKLAASEAATAITHQAMQILGGMGYVKEMPAERHYRDARITEIYEGTSEIQRLVVAGHLLK 408
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDS_MEGEL (Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera elsdenii PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 73/173 (42.20%), Postives = 104/173 (60.12%), Query Frame = -3 Query: 176 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 694 S T ELVF++ VP EN+LG+EGKG + M LD R+ +AA LGI +A + + Y +QR QFG+PL +FQ I K ADM ++++R+ VY A GK D A A++ A +V +A+Q GG GY EY R +RDAK+ +I GT+E++ M+ G LL+ Sbjct: 211 SQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDAAIAKRVASDVAMRVTTEAVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALLR 383
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADM_CAEEL (Probable medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=T08G2.3 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.222e-29 Identity = 74/173 (42.77%), Postives = 99/173 (57.23%), Query Frame = -3 Query: 179 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILC-AAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLL 694 SDT + FE+ VP ENVLG G G V M D+ R +AAG LG+ C+D Y +R+ FG + Q +Q ADM L+ +R Y A D DN KV A + C AA+ A Q A A+Q GGNG+ +EY +L+RDAK+Y+I GTS+I+R++I R LL Sbjct: 235 SDTRVITFEDVRVPAENVLGAPGAGFKVAMEAFDMTRPGVAAGALGLSWRCLDESAKYALERKAFGTVIANHQAVQFMLADMAVNLELARLITYKSANDVDN-KVRSSYNASIAKCFAADTANQAATNAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRIVISRMLL 406
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDS_CLOAB (Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium acetobutylicum GN=bcd PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 71/173 (41.04%), Postives = 102/173 (58.96%), Query Frame = -3 Query: 176 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 694 S T ELVFE+ VP EN++G+EGKG + M LD R+ +AA LGI + + Y+++R+QFGR L +FQ + ADM A++S+R VY A G D A L AA A V +A+Q GG GY +Y R++RDAK+ EI GTSE+++++I K+ + Sbjct: 207 SSTTELVFEDMIVPVENMIGKEGKGFPIAMKTLDGGRIGIAAQALGIAEGAFNEARAYMKERKQFGRSLDKFQGLAWMMADMDVAIESARYLVYKAAYLKQAGLPYTVDAARAKLHAANVAMDVTTKAVQLFGGYGYTKDYPVERMMRDAKITEIYEGTSEVQKLVISGKIFR 379
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDP_MYCTU (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium tuberculosis GN=fadE25 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.680e-27 Identity = 62/175 (35.43%), Postives = 100/175 (57.14%), Query Frame = -3 Query: 176 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILC-AAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 697 GS T EL FENC +P + ++G+ G G ++ LD R + A +GI Q +D + Y + R+QFG + FQ +Q ADM ++++R VYS A + G+ D + C A++ A +V A+Q GG GY ++ R +RDAK+ +I GT++I+R+++ R LL+ Sbjct: 215 GSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMVYSAAARAERGEPDLGFISAASKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSRALLR 389 The following BLAST results are available for this feature:
BLAST of CB304801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304801 ID=CB304801; Name=CB304801; organism=Citrus sinensis; type=EST; length=699bpback to top |