CB304801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADV_MOUSE (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadvl PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16 Identity = 57/169 (33.73%), Postives = 91/169 (53.85%), Query Frame = -3 Query: 194 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGV--ILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMII 694 S+T E+ F+ VP+ENVLG+ G G V ++ L+ R +AA G M++ I + + R QFG + F IQ K A M + S Y ++ + D G D + A + I C +E A +VA + IQ +GG G++ E R+LRD +++ I G ++I R+ + Sbjct: 306 SNTSEVYFDGVKVPSENVLGEVGDGFKVAVNILNNGRFGMAATLAGTMKSLIAKAVDHATNRTQFGDKIHNFGVIQEKLARMAILQYVTESMAYMLSANMDQGFKDFQIEAAISKIFC-SEAAWKVADECIQIMGGMGFMKEPGVERVLRDIRIFRIFEGANDILRLFV 473
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADV_RAT (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadvl PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16 Identity = 56/168 (33.33%), Postives = 89/168 (52.98%), Query Frame = -3 Query: 194 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVI-LCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMII 694 S+T E+ F+ VP ENVLG+ G G V ++ L+ R +AA G M+A I + + R QFG + F IQ K A M + S Y ++ + D G D + A + + +E A +V + IQ +GG G++ E R+LRD +++ I GT++I R+ + Sbjct: 305 SNTSEVYFDGVKVPAENVLGEVGDGFKVAVNILNNGRFGMAATLAGTMKAIIAKAVDHATNRTQFGDKIHNFGVIQEKLARMAILQYVTESMAYMLSANMDQGFKDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDIRIFRIFEGTNDILRLFV 472
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: GCDH_CAEEL (Probable glutaryl-CoA dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=F54D5.7 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 55/171 (32.16%), Postives = 87/171 (50.88%), Query Frame = -3 Query: 182 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKL 694 S T ++ ++ VP EN+L +G+ L+ RL +A G LG + C + Y R+QFGRPL + Q +Q K ADM T + V+R D GKV + + + + +A +VA +A LGGNG V+EY R + + + GT ++ +I+GR + Sbjct: 233 SITGQIAMDDVPVPEENLL-PNAEGLQGPFGCLNNARLGIAWGALGAAEECFHLARQYTLDRQQFGRPLAQNQLMQLKMADMLTEISLGLQGCLRVSRLKDEGKVQSEQISIIKRNSCGKALEVARKARDMLGGNGIVDEYHIMRHMVNLETVNTYEGTHDVHALILGRAI 402
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: BBSG_THAAR ((R)-benzylsuccinyl-CoA dehydrogenase OS=Thauera aromatica GN=bbsG PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13 Identity = 53/171 (30.99%), Postives = 83/171 (48.54%), Query Frame = -3 Query: 179 TCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPK-DCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLL 688 T + +N V +E VLG+ G + + + R+ LAA G+ + I +++ R+ FG L + Q +Q AD L+ R +Y A D G D + + A + + A E T+VA +AIQ GG G E + R +++ + G SEI RM I +KLL Sbjct: 224 TWSVYLDNVRVGDEAVLGEVGDAFIPLQNRFGVRRIELAAHCTGMAERLIQMMIDQANLRKTFGVALADRQTVQNWIADSTIELEQVRLQLYFTAWKSDQGHKDLRLEAASLKIAATEMLTRVADRAIQLHGGLGLSREMGIEYVARMVRIWRVVEGASEIHRMSIAKKLL 394
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: MBTN_MYCSS (Acyl-[acyl-carrier-protein] dehydrogenase mbtN OS=Mycobacterium sp. (strain MCS) GN=mbtN PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 47/152 (30.92%), Postives = 78/152 (51.32%), Query Frame = -3 Query: 209 FVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYV-NEYATGRLLRDAKLYEIGAGTSEI 661 +VP + ++ + G G+ + GL ERL +A G Q I + L + +R QFG L E Q ++ + AD+ + R Y++A G++D + A + + AA +V + + GG+GY+ +E GR RD KL +G GT E+ Sbjct: 214 WVPGDALIARPGTGLAAISWGLAHERLSIAGQVAGASQRVIGITLARMMKRRQFGHTLYEHQALRMRMADLQARVDMLR---YALAGIAAGGRLDLRAAAAIKVTAARLGEEVLSECMHIFGGSGYLTDETPLGRWWRDMKLARVGGGTDEV 362
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: GCDH_DICDI (Glutaryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=gcdh PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 53/171 (30.99%), Postives = 78/171 (45.61%), Query Frame = -3 Query: 182 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKL 694 S T +V E+ VP + E KG+ S L+ R + G LG + C Y R+QFG+PL Q Q K ADM T + Y V R D GK P+ + + + ++ +A Q+ LGGNG +EY R + + GT +I +I+GR + Sbjct: 245 SITGMIVMEDVEVP-PTAMFPEVKGLRGPFSCLNKARYGIGWGSLGAAEFCYSTARQYGLDRKQFGKPLAANQLYQKKLADMATEISLGLQACYQVGRLIDAGKATPERISLIKRNSCGKSLDIARQSRDMLGGNGIADEYHVIRHAANLETVNTYEGTHDIHALILGRAI 414
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: GCDH_PIG (Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa GN=GCDH PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 53/171 (30.99%), Postives = 79/171 (46.20%), Query Frame = -3 Query: 182 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKL 694 S T ++ ++ VP ENVL + + V L+ R ++ G LG + C+ Y R QFG PL + Q IQ K ADM T + + R D KV P+ + + +A +A QA LGGNG +EY R + + GT +I +I+GR + Sbjct: 229 SATGMIIMDDVEVPEENVL-PKASSLAVPFGCLNNARYGISWGVLGAAEFCLHTARQYTLDRIQFGVPLAKNQLIQRKLADMLTEITLGLHACLQLGRLKDQDKVTPEMVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 398
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: MBTN_MYCPA (Acyl-[acyl-carrier-protein] dehydrogenase mbtN OS=Mycobacterium paratuberculosis GN=mbtN PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 47/152 (30.92%), Postives = 75/152 (49.34%), Query Frame = -3 Query: 209 FVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGY-VNEYATGRLLRDAKLYEIGAGTSEI 661 +VP + ++ + G G+ + GL ER+ +A Q I + L + R QFGR L E Q ++ + AD+ + + + +A G++D + AGV + AA +V + + GG GY V E GR RD KL +G GT E+ Sbjct: 215 WVPADALVARAGTGLAAISWGLAHERMSIAGQIAASCQRAIGITLARMMTRRQFGRTLFEHQALRLRMADLQARVDLLQHGLNGIAA---QGRLDLRAAAGVKVTAARLGEEVMSECMHIFGGAGYLVEETPLGRWWRDMKLARVGGGTDEV 363
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: MBTN_MYCTU (Acyl-[acyl-carrier-protein] dehydrogenase mbtN OS=Mycobacterium tuberculosis GN=mbtN PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 44/152 (28.95%), Postives = 77/152 (50.66%), Query Frame = -3 Query: 209 FVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGY-VNEYATGRLLRDAKLYEIGAGTSEI 661 +VP + ++ + G G+ + GL ER+ +A Q I + L + R QFG+ L E Q ++ + AD+ + R ++ +A + G+++ + A V + AA +V + + GG GY V+E G+ RD KL +G GT E+ Sbjct: 213 WVPADALVARAGTGLAAISWGLAHERMSIAGQIAASCQRAIGITLARMMSRRQFGQTLFEHQALRLRMADLQARVDLLRYALHGIA---EQGRLELRTAAAVKVTAARLGEEVISECMHIFGGAGYLVDETTLGKWWRDMKLARVGGGTDEV 361
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: MBTN_MYCBO (Acyl-[acyl-carrier-protein] dehydrogenase mbtN OS=Mycobacterium bovis GN=mbtN PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 44/152 (28.95%), Postives = 77/152 (50.66%), Query Frame = -3 Query: 209 FVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGY-VNEYATGRLLRDAKLYEIGAGTSEI 661 +VP + ++ + G G+ + GL ER+ +A Q I + L + R QFG+ L E Q ++ + AD+ + R ++ +A + G+++ + A V + AA +V + + GG GY V+E G+ RD KL +G GT E+ Sbjct: 213 WVPADALVARAGTGLAAISWGLAHERMSIAGQIAASCQRAIGITLARMMSRRQFGQTLFEHQALRLRMADLQARVDLLRYALHGIA---EQGRLELRTAAAVKVTAARLGEEVISECMHIFGGAGYLVDETTLGKWWRDMKLARVGGGTDEV 361 The following BLAST results are available for this feature:
BLAST of CB304801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304801 ID=CB304801; Name=CB304801; organism=Citrus sinensis; type=EST; length=699bpback to top |