CB304801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDP_MYCBO (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis GN=fadE25 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.680e-27 Identity = 62/175 (35.43%), Postives = 100/175 (57.14%), Query Frame = -3 Query: 176 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILC-AAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 697 GS T EL FENC +P + ++G+ G G ++ LD R + A +GI Q +D + Y + R+QFG + FQ +Q ADM ++++R VYS A + G+ D + C A++ A +V A+Q GG GY ++ R +RDAK+ +I GT++I+R+++ R LL+ Sbjct: 215 GSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMVYSAAARAERGEPDLGFISAASKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSRALLR 389
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDA_BACSU (Acyl-CoA dehydrogenase OS=Bacillus subtilis GN=acdA PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.194e-27 Identity = 69/171 (40.35%), Postives = 98/171 (57.31%), Query Frame = -3 Query: 182 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKL 694 S T E++FE+C VP LG+EG+G + M LD R +AA +GI Q +D L Y ++R+QFG+ + E Q I K ADM T +++SR Y A +G K A L A + A +V +A+Q GG GY +Y R +RDAK+ +I GT EI+R++I R L Sbjct: 207 SPTTEIMFEDCVVPASKRLGEEGEGFKIAMKTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQQGIAFKLADMATMIEASRLLTYQAAWLESSGLPYGKASAMSKLMAGDTAMKVTTEAVQIFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRML 377
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADM_DROME (Probable medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26 Identity = 67/171 (39.18%), Postives = 99/171 (57.89%), Query Frame = -3 Query: 182 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKL 694 SDT + FE+ VP ENVL EG G + M D R +AAG +G+ Q C+D L Y +R+ FG P+ Q +Q ADM +++SR A + D G+ + + AA+ A ++A A+Q GGNG+ +EY +L+RDAK+Y+I GTS+I+R+II R + Sbjct: 241 SDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRRNSYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNM 411
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDP_MYCLE (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae GN=fadE25 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.168e-26 Identity = 60/175 (34.29%), Postives = 100/175 (57.14%), Query Frame = -3 Query: 176 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILC-AAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 697 GS T EL F+ C +P + ++G+ G G ++ LD R + A +GI Q +D + Y + R+QFG + FQ IQ ADM ++++R VY+ A + G+ D + C A++ A +V A+Q GG GY +++ R +RDAK+ +I GT++I+R+++ R LL+ Sbjct: 215 GSPTTELYFDKCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQSIQFMLADMAMKVEAARLIVYAAAARAERGEPDLGFISAASKCFASDIAMEVTTDAVQLFGGAGYTSDFPVERFMRDAKITQIYEGTNQIQRVVMSRALLR 389
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADM_PANTR (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pan troglodytes GN=ACADM PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 66/170 (38.82%), Postives = 98/170 (57.65%), Query Frame = -3 Query: 185 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRK 694 SDT +VFE+ VP ENVL +G G V M D R V+AAG +G+ Q +D Y +R+ FG+ L E Q I A+M ++ +R A + D+G+ + + A + A Q+A A+Q LGGNG+ EY +L+RDAK+Y+I GTS+I+R+I+ R+ Sbjct: 245 SDTRGIVFEDVKVPRENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVARE 414
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADM_HUMAN (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADM PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 66/170 (38.82%), Postives = 98/170 (57.65%), Query Frame = -3 Query: 185 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRK 694 SDT +VFE+ VP ENVL +G G V M D R V+AAG +G+ Q +D Y +R+ FG+ L E Q I A+M ++ +R A + D+G+ + + A + A Q+A A+Q LGGNG+ EY +L+RDAK+Y+I GTS+I+R+I+ R+ Sbjct: 245 SDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVARE 414
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDSB_BOVIN (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADSB PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25 Identity = 62/169 (36.69%), Postives = 95/169 (56.21%), Query Frame = -3 Query: 188 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGR 694 S TC + FEN VP N+LGQ G G + L+ R+ +AA LG+ Q C D +PY+++R+QFGR + +FQ +Q + A M T L+++R Y+ AR + G+ K+ + A+E A + + I+ +GG GY Y + RDAK+ I GTS I+ I + Sbjct: 258 SSTCPVTFENVKVPKTNILGQVGHGYKYAIGSLNEGRIGIAAQMLGVAQGCFDYTIPYIKERKQFGRRVFDFQGLQHQVAHMATQLEAARLLTYNAARLLEAGRPMIKEASMAKYHASELAGLITSKCIEWMGGVGYTKSYPVEKYFRDAKIGTIYEGTSNIQLNTIAK 426
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADM_PIG (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADM PE=1 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25 Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = -3 Query: 185 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRK 694 SDT +VFE+ VP ENVL EG G + M D R +AAG +G+ Q +D Y +R+ FG+ L E Q I ADM ++ +R A + D+G+ + + AA+ A Q+A A+Q GGNG+ EY +L+RDAK+Y+I GT++I+R+II R+ Sbjct: 245 SDTRGIVFEDVRVPKENVLTGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLADMAMKVELARLSYQRAAWEIDSGRRNTYYASIAKAYAADIANQLATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRIIIARE 414
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDSB_PONAB (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADSB PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.803e-25 Identity = 63/171 (36.84%), Postives = 95/171 (55.56%), Query Frame = -3 Query: 182 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKL 694 S TC L FEN VP N+LGQ G G + L+ R+ +AA LG+ Q C D +PY+++R QFG+ L +FQ +Q + A + T L+++R Y+ AR + GK K+ + A+E A Q + I+ +GG GY +Y + RDAK+ I G S I+ I + + Sbjct: 258 SSTCPLTFENVKVPETNILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHI 428
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDSB_HUMAN (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADSB PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.803e-25 Identity = 63/171 (36.84%), Postives = 95/171 (55.56%), Query Frame = -3 Query: 182 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKL 694 S TC L FEN VP N+LGQ G G + L+ R+ +AA LG+ Q C D +PY+++R QFG+ L +FQ +Q + A + T L+++R Y+ AR + GK K+ + A+E A Q + I+ +GG GY +Y + RDAK+ I G S I+ I + + Sbjct: 258 SSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHI 428 The following BLAST results are available for this feature:
BLAST of CB304801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304801 ID=CB304801; Name=CB304801; organism=Citrus sinensis; type=EST; length=699bpback to top |