CB304801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDSB_RAT (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadsb PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23 Identity = 60/171 (35.09%), Postives = 96/171 (56.14%), Query Frame = -3 Query: 182 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKL 694 S TC+L FEN VP +VLG+ G G + L+ R+ +AA LG+ Q C D +PY+++R QFG+ + +FQ +Q + A + T L+++R Y+ AR + G+ K+ + A+E A + I+ +GG GY +Y + RDAK+ I GTS I+ I + + Sbjct: 258 SSTCQLTFENVKVPETSVLGKIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAHVATQLEAARLLTYNAARLVEAGRPFIKEASMAKYYASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDAKIGTIYEGTSNIQLNTIAKHI 428
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDSB_MOUSE (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadsb PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23 Identity = 59/171 (34.50%), Postives = 95/171 (55.56%), Query Frame = -3 Query: 182 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKL 694 S TC+L FEN VP N+LG+ G G + L+ R+ +AA LG+ Q C D +PY+++R QFG+ + +FQ +Q + A + T L+++R Y+ AR + G+ K+ + A+E A + I+ +GG GY +Y + RDAK+ I G S I+ I + + Sbjct: 258 SSTCQLTFENVKVPETNILGKIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAQVATQLEATRLLTYNAARLVEAGRPFIKEASMAKYYASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDAKIGTIYEGASNIQLNTIAKHI 428
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACAD8_BOVIN (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACAD8 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.592e-23 Identity = 60/173 (34.68%), Postives = 100/173 (57.80%), Query Frame = -3 Query: 173 TCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDP-KDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLKQ 688 T ++FE+C VP N +G EG+G + M GL+ R+ +A+ LG A I + Y++ R+QFG PL Q++Q + ADM L +SR + + A + D C+ L A + + QA+Q GG GY+ +YA + +RD+++++I G++E+ RM+I R LL++ Sbjct: 244 TQAVIFEDCAVPVANRIGDEGQGFLIAMKGLNGGRINVASCSLGAAHASIVLARDYLKVRKQFGEPLANSQYLQFQLADMAARLVASRLMIRTAATALQEEREDAIVLCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRMLISRSLLQE 416
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADM_BOVIN (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADM PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23 Identity = 63/170 (37.06%), Postives = 95/170 (55.88%), Query Frame = -3 Query: 185 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRK 694 SDT +VFE+ VP ENVL EG G + M D R +AA +G+ Q +D Y +R+ FG+ L E Q I A+M ++ +R A + D+G+ + + A + A Q+A A+Q GGNG+ EY +L+RDAK+Y+I GT++I+R+II R+ Sbjct: 245 SDTRGIVFEDVRVPKENVLIGEGAGFKIAMGAFDKTRPPVAAAAVGLAQRALDEATKYALERKTFGKLLIEHQGISFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYASIAKAYAGDIANQLASDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIARE 414
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACAD8_MOUSE (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acad8 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23 Identity = 60/172 (34.88%), Postives = 100/172 (58.14%), Query Frame = -3 Query: 176 TCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKD-CAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 688 T ++FE+C VP N +G EG+G + M GL+ R+ +A+ LG A + + +++ R+QFG PL Q++Q + ADM T L +SR + + A + D C+ L A E + QA+Q GG GY+ +YA + +RD+++++I G++E+ RM+I R LL+ Sbjct: 241 TRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGRINVASCSLGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADMATKLVASRLMIRTAAVALQEEREDAVALCSMAKLFATEECFAICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILEGSNEVMRMLISRNLLQ 412
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDSB_DICDI (Probable short/branched chain specific acyl-CoA dehydrogenase OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.627e-22 Identity = 56/173 (32.37%), Postives = 96/173 (55.49%), Query Frame = -3 Query: 176 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 694 S TCE++ +NC V ++LG+ G+G + + GL+ R+ +AA LG+ Q D +PY+ +R+QFG+P+ FQ +Q AD+ +++ R Y+ AR + G + L + A + A I LGG G+ E+ + RD+K+ +I GTS I+ I ++++K Sbjct: 237 SSTCEVILDNCVVKPTDILGELGRGYKIAIEGLNEGRIGIAAQMLGLAQGVFDSTIPYLMERKQFGKPIATFQGMQFTYADLAVDIEAGRLLTYNAARIKEAGLPFVFQASMAKLHCSRVAEKAASACISMLGGVGFTKEFPAEKFFRDSKVGQIYEGTSNIQLQTIAKEIVK 409
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADM_RAT (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadm PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 61/174 (35.06%), Postives = 96/174 (55.17%), Query Frame = -3 Query: 173 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLKQ 694 SDT + FE+ VP ENVL EG G + M D R +AAG +G+ Q +D Y R+ FG+ L E Q + A+M ++ +R A + D+G+ + + A + A Q+A A+Q GG G+ EY +L+RDAK+Y+I GT++I+R+II R+ +++ Sbjct: 245 SDTRGITFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQRALDEATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYFASIAKAFAGDIANQLATDAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAREHIEK 418
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADM_MOUSE (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadm PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 61/174 (35.06%), Postives = 96/174 (55.17%), Query Frame = -3 Query: 173 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLKQ 694 SDT + FE+ VP ENVL EG G + M D R +AAG +G+ Q +D Y R+ FG+ L E Q + A+M ++ +R A + D+G+ + + A + A Q+A A+Q GG G+ EY +L+RDAK+Y+I GT++I+R+II R+ +++ Sbjct: 245 SDTRGIAFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQRALDEATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAREHIEK 418
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADM_MACFA (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADM PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 61/170 (35.88%), Postives = 95/170 (55.88%), Query Frame = -3 Query: 185 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRK 694 SDT +VFE+ V ENVL +G G + M D R +++G +G+ Q +D Y +R+ FG+ L E Q I A+M ++ +R A + D+G+ + + A + A Q+A A+Q GGNG+ EY +L+RDAK+Y+I GTS+I+R+II R+ Sbjct: 245 SDTRGIVFEDVKVLKENVLIGDGAGFKIAMGAFDKTRPTVSSGAVGLAQRALDEATKYALERKTFGKLLIEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIIARE 414
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACAD8_DICDI (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=acad8 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 62/177 (35.03%), Postives = 99/177 (55.93%), Query Frame = -3 Query: 176 TCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVI------LCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 688 T L+FE+C VP N++G+EG+G + M+ L+ R+ + A LG Q+C+ +V+ R+QF +PL FQ +Q K ADM T L +SR + + A +D KD + + L A + +V ++Q GG GY+ +Y R LRD +++ I G+ + R+II R+L K Sbjct: 242 TRALIFEDCRVPVGNLIGKEGQGFSIAMNALNGGRINIGACSLGGAQSCLVAARDHVKVRKQFNQPLEHFQAVQFKMADMATKLHASRIMIRNAA-----AMLDAKDPSAHVYIAMAKLFACDECFKVTDDSLQLFGGYGYLKDYPVERYLRDLRVHRILEGSDAVMRLIISRELSK 413 The following BLAST results are available for this feature:
BLAST of CB304801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304801 ID=CB304801; Name=CB304801; organism=Citrus sinensis; type=EST; length=699bpback to top |