CB304801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: CAIA_SALCH (Crotonobetainyl-CoA dehydrogenase OS=Salmonella choleraesuis GN=caiA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = -3 Query: 173 CELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLKQ 685 CE+ F++ + +++ G+EG G + D ER ++A G + Y QR QFG +G FQ IQ K A M L S ++ + A DNG + D A A A +V A+Q LGG G + R RD ++ + G+ E++ + +GR +LKQ Sbjct: 208 CEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLKQ 378
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: CAIA_SALA4 (Crotonobetainyl-CoA dehydrogenase OS=Salmonella agona (strain SL483) GN=caiA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = -3 Query: 173 CELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLKQ 685 CE+ F++ + +++ G+EG G + D ER ++A G + Y QR QFG +G FQ IQ K A M L S ++ + A DNG + D A A A +V A+Q LGG G + R RD ++ + G+ E++ + +GR +LKQ Sbjct: 208 CEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLKQ 378
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADV_HUMAN (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADVL PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 57/168 (33.93%), Postives = 88/168 (52.38%), Query Frame = -3 Query: 194 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVI-LCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMII 694 S+T E+ F+ VP+ENVLG+ G G V M L+ R +AA G M+ I + + R QFG + F IQ K A M + S Y V+ + D G D + A + + +E A +V + IQ +GG G++ E R+LRD +++ I GT++I R+ + Sbjct: 305 SNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFV 472
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: CAIA_SALTI (Crotonobetainyl-CoA dehydrogenase OS=Salmonella typhi GN=caiA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = -3 Query: 173 CELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLKQ 685 CE+ F++ + +++ G+EG G + D ER ++A G + Y QR QFG +G FQ IQ K A M L S ++ + A DNG + D A A A +V A+Q LGG G + R RD ++ + G+ E++ + +GR +LKQ Sbjct: 208 CEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCTFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDTAMQVLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLKQ 378
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADL_HUMAN (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADL PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18 Identity = 53/171 (30.99%), Postives = 91/171 (53.22%), Query Frame = -3 Query: 179 DTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLL 691 DT EL FE+ +P +LG+E KG Y +M L ERL++A + + + YV+QR+ FG+ + Q +Q K A++ T + +R++V + + + ++D A+E VA +Q GG GY+ EY + DA++ I GT+EI + +I R+++ Sbjct: 257 DTAELFFEDIRLPASALLGEENKGFYYIMKELPQERLLIADVAISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTHICVTRAFVDNCLQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIAREIV 427
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: CAIA_CITK8 (Crotonobetainyl-CoA dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.074e-18 Identity = 53/171 (30.99%), Postives = 81/171 (47.37%), Query Frame = -3 Query: 173 CELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLKQ 685 CE+ F++ + +++ G+EG G + D ER ++A G + Y QR QFG +G FQ IQ K A M L S ++ + A DNG + D A A A V A+Q LGG G + R RD ++ + G+ E++ + +GR +LKQ Sbjct: 208 CEINFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGETIGRFQLIQEKFAHMAIKLNSMKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFDVVDSAMQVLGGVGIAGNHRITRFWRDLRVDRVSGGSDEMQILTLGRAVLKQ 378
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADL_MACFA (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADL PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.074e-18 Identity = 53/171 (30.99%), Postives = 91/171 (53.22%), Query Frame = -3 Query: 179 DTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLL 691 DT EL FE+ +P +LG+E KG Y +M L ERL++A + + + YV+QR+ FG+ + Q +Q K A++ T + +R++V + + + ++D A+E VA +Q GG GY+ EY + DA++ I GT+EI + +I R+++ Sbjct: 257 DTAELFFEDVRLPASALLGEENKGFYYIMKELPQERLLIADMAVSASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTHICVTRAFVDNCLQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIAREIV 427
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: CAIA_SALAR (Crotonobetainyl-CoA dehydrogenase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=caiA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.239e-18 Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = -3 Query: 173 CELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLKQ 685 CE+ F+ + ++ G+EG G + D ER ++A G + Y QR QFG +G FQ IQ K A M L + ++ + A DNG + D A A A +V A+Q LGG G + R RD ++ + G+ E++ + +GR +LKQ Sbjct: 208 CEITFDEVELDEKDRFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGETIGRFQLIQEKFAHMAIKLNAMKNMLLEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQ 378
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADV_BOVIN (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADVL PE=2 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 9.239e-18 Identity = 57/168 (33.93%), Postives = 87/168 (51.79%), Query Frame = -3 Query: 194 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVI-LCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMII 694 S+T E+ F+ VP ENVLG+ G G V M L+ R +AA G M+ I + + R QFG + F IQ K A M + S Y V+ + D G D + A + + +E A +V + IQ +GG G++ E R+LRD +++ I GT++I R+ + Sbjct: 305 SNTAEVYFDGVRVPAENVLGEVGGGFKVAMHILNNGRFGMAAALAGTMKGIIAKAVDHAANRTQFGEKIHNFGLIQEKLARMAMLQYVTESMAYMVSANMDQGSTDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFV 472
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: FADE_BACSU (Probable acyl-CoA dehydrogenase OS=Bacillus subtilis GN=fadE PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17 Identity = 58/194 (29.90%), Postives = 91/194 (46.91%), Query Frame = -3 Query: 173 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYS------------VARDCDNGKVDPK-------DCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLKQ 697 GS T L+ + VP EN+LG+ GKG + + L++ R LA G +G + I++ Y QR QF P+ F Q K M + L + S VY A D +G+ K +C+ + +E + + +Q GG G++ EY R RD+++ I GT+EI R+I+ LK+ Sbjct: 229 GSSTRTLILDQAEVPKENLLGEIGKGHVIAFNILNIGRYKLAVGTIGASKRVIELSAAYANQRRQFKTPIAGFSLTQEKIGTMASRLYAMESSVYRTVGLFEDNMSQFTAEDLKDGRQIAKSIAEYAIECSLNKVFGSETLDYIVDEGVQIHGGYGFMQEYEVERAYRDSRINRIFEGTNEINRLIVPSTFLKK 422 The following BLAST results are available for this feature:
BLAST of CB304801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304801 ID=CB304801; Name=CB304801; organism=Citrus sinensis; type=EST; length=699bpback to top |