CB304814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_CANAL (60S ribosomal protein L36 OS=Candida albicans GN=RPL36 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.772e-18 Identity = 45/86 (52.33%), Postives = 63/86 (73.26%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KG T KE+ P+ + RKG +S+R FVR++++EVAG APYE+R+ EL R +KRA K+AK++LGTHKRA +K EEM + +SR Sbjct: 12 KGRKTTAKEVAPKISYRKGASSQRTVFVRSIVKEVAGLAPYERRLIELIRNAGEKRAKKLAKKRLGTHKRALRKVEEMTQVIAESR 97
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_TRIHM (60S ribosomal protein L36 OS=Trichoderma hamatum GN=rpl36 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.890e-18 Identity = 45/86 (52.33%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KGH T + + PR + KG SKR FVR V++EVAG APYE+R+ EL R KDKRA K+AK++LGT RAK+K +E+ + +SR Sbjct: 17 KGHKTTARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYERRVIELLRNSKDKRARKLAKKRLGTFGRAKRKVDELQRVIAESR 102 HSP 2 Score: 22.7126 bits (47), Expect = 1.890e-18 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = -2 Query: 491 MAPKQP-NTGLFVGLNKG 541 MA + P TGL VGLNKG Sbjct: 1 MAKEAPAKTGLAVGLNKG 18
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_DICDI (60S ribosomal protein L36 OS=Dictyostelium discoideum GN=rpl36 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.404e-15 Identity = 42/87 (48.28%), Postives = 62/87 (71.26%), Query Frame = -3 Query: 235 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSRA 495 KGH V K+ + +K +KRV +R VIRE++GF+PYE+R++EL + G DKRALKVAK++LG+ + KKKR+++ N RK+ A Sbjct: 20 KGHAVAKRTVTS--TFKKQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDDIANINRKASA 104
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36B_YEAST (60S ribosomal protein L36-B OS=Saccharomyces cerevisiae GN=RPL36B PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 5.335e-15 Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KG VT+ P+ + +KG S R FVR+++RE+AG +PYE+R+ +L R +KRA KVAK++LG+ RAK K EEM N + SR Sbjct: 13 KGKKVTQMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 98
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_DROME (60S ribosomal protein L36 OS=Drosophila melanogaster GN=RpL36 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.968e-15 Identity = 45/96 (46.88%), Postives = 57/96 (59.38%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGK----------TSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KGH +K D+K K ++ F+R ++REV G APYEKR EL +V KDKRALK KR+LGTH RAK+KREE+ N L + R Sbjct: 13 KGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLR 108
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36A_YEAST (60S ribosomal protein L36-A OS=Saccharomyces cerevisiae GN=RPL36A PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 6.968e-15 Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KG VT P+ + +KG S R FVR+++RE+AG +PYE+R+ +L R +KRA KVAK++LG+ RAK K EEM N + SR Sbjct: 13 KGKKVTSMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 98
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36X_HUMAN (Putative 60S ribosomal protein L36-like 1 OS=Homo sapiens PE=5 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14 Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KGH +TK PR + G+ +K VR +I+EV GF PYE+ EL +V KDK+ALK K+++GTH K+KREE+ N L +R Sbjct: 13 KGHKLTKNLSKPRHSRSLGRPTKHTKCVRGMIQEVCGFTPYERCTMELLKVSKDKQALKFIKKRVGTHIHTKRKREELSNVLAITR 98 The following BLAST results are available for this feature:
BLAST of CB304814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304814 ID=CB304814; Name=CB304814; organism=Citrus sinensis; type=EST; length=593bpback to top |