CB304823
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304823 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.144e-28 Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = -2 Query: 221 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 496 A+TCGQV+ ++ PC+++ R G P CC+GVRSLN AARTT DR+AACNCLK A R I G+N AA +P +CGVSIPY IS +TDCSRV Sbjct: 30 AVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121
BLAST of CB304823 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.144e-28 Identity = 60/97 (61.86%), Postives = 71/97 (73.20%), Query Frame = -2 Query: 218 PVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 508 P AITCGQVT +LAPC+A+LR G P CC GV++L +ARTT DRQ AC CLK A +I GIN AAGLP CGV+IPYKISP+TDCS+V+ Sbjct: 20 PCAEAITCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 114
BLAST of CB304823 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.064e-27 Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = -2 Query: 221 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 496 AI+CGQV ++APCI++ R G P CC+GVRSLN AARTT DR+AACNCLK A + G+NA AA +P +CGVSIPY IS +TDCSRV Sbjct: 28 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 119
BLAST of CB304823 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.064e-27 Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = -2 Query: 218 AITCGQVTGSLAPCIAFLR-TGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 496 A+T GQVT SLAPCI +LR +G PP CC G++SLN AA+TTP RQAAC C+K A I GIN +A+GLP +CGV+IPYKISP+TDC+ V+ Sbjct: 27 AVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120
BLAST of CB304823 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.064e-27 Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = -2 Query: 218 AITCGQVTGSLAPCIAFLR-TGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 496 A+T GQVT SLAPCI +LR +G PP CC G++SLN AA+TTP RQAAC C+K A I GIN +A+GLP +CGV+IPYKISP+TDC+ V+ Sbjct: 23 AVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116
BLAST of CB304823 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.279e-27 Identity = 56/92 (60.87%), Postives = 70/92 (76.09%), Query Frame = -2 Query: 221 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 496 AI+CGQV+ ++A C+++ R G P CC+GVRSLN AARTT DR+AACNCLK A R I G+NA AA +P +CGVS+PY IS +TDCSRV Sbjct: 26 AISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117
BLAST of CB304823 vs. ExPASy Swiss-Prot
Match: NLTP5_LENCU (Non-specific lipid-transfer protein 5 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.536e-26 Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = -2 Query: 218 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 496 AI+CG VTG L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNC+K A SI +N N AA LP +CGV+IPYKIS +T+C+ V+ Sbjct: 25 AISCGAVTGDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCMKSAASSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 116
BLAST of CB304823 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.837e-26 Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = -2 Query: 218 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 496 AI+CG VT L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A SI +N N AA LP +CGV+IPYKIS +T+C+ V+ Sbjct: 18 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109
BLAST of CB304823 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.623e-26 Identity = 56/93 (60.22%), Postives = 67/93 (72.04%), Query Frame = -2 Query: 218 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 496 AI+CG VT L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A SI +N N AA LP +CGV IPYKIS +T+C+ V+ Sbjct: 26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117
BLAST of CB304823 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.623e-26 Identity = 56/93 (60.22%), Postives = 67/93 (72.04%), Query Frame = -2 Query: 218 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 496 AI+CG VT L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A SI +N N AA LP +CGV+IPYKIS T+C+ V+ Sbjct: 26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117 The following BLAST results are available for this feature:
BLAST of CB304823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304823 ID=CB304823; Name=CB304823; organism=Citrus sinensis; type=EST; length=632bpback to top |