CB304826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 88.1965 bits (217), Expect = 1.896e-17 Identity = 51/123 (41.46%), Postives = 63/123 (51.22%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQL+ N NY AGRAIG D L +P+ VA D +SFKTA+WFWMT H+V+ GF +NG ECG +V DR+ Y YC GV G+ L+C Sbjct: 189 RGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 311
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.234e-17 Identity = 52/123 (42.28%), Postives = 64/123 (52.03%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY +AG+AIG D +N+P+ VA D VISFKTA WFWMT H+V+ GF ING ECG QV DR+ Y YC V G+ L+C Sbjct: 177 RGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDC 299
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 9.410e-17 Identity = 51/123 (41.46%), Postives = 62/123 (50.41%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQL+ N NY AGRAIG D L +P+ VA D + FKTA+WFWMT H+V+ GF ING ECG +V DR+ Y YC GV G+ L+C Sbjct: 137 RGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 259
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.229e-16 Identity = 48/123 (39.02%), Postives = 64/123 (52.03%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY GRAIG + LN+P+ VA + V+SFK+A+WFWMT H V+ G+ ING ECG + +V DR+ Y YC GV PG ++C Sbjct: 197 RGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDC 319
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.605e-16 Identity = 50/123 (40.65%), Postives = 62/123 (50.41%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQL+ N NY AGRAIG D L +P+ VA D +SFKTA+WFWMT H+V+ GF +NG ECG +V DR+ Y YC V G+ L+C Sbjct: 192 RGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDC 314
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.605e-16 Identity = 49/123 (39.84%), Postives = 63/123 (51.22%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY AG+A+GFDGL +PE VA I+F+TALWFWMT H V+ GF +NG EC +V +R+ Y YC+ GVD G L+C Sbjct: 162 RGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDC 284
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.096e-16 Identity = 51/123 (41.46%), Postives = 62/123 (50.41%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+QLT N NY + GRAIG D LN+P+ +A D ISFK+A WFWMT H V+ GF ING ECG +V DR+ Y YC GV G+ L+C Sbjct: 184 RGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDC 306
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.576e-16 Identity = 48/123 (39.02%), Postives = 63/123 (51.22%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY AG+AIG + L++P+ VA D +SFKTA WFWMT H+V+ G+ ING ECG +V DR+ Y YC GV G+ L+C Sbjct: 193 RGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDC 315
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 6.099e-16 Identity = 49/123 (39.84%), Postives = 63/123 (51.22%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+QL+ N NY + GRAIG D LN+P+ ++ D ISFK+A WFWMT H+V+ G+ ING ECG QV DR+ Y YC GV G+ L+C Sbjct: 165 RGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDC 287
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 7.966e-16 Identity = 49/123 (39.84%), Postives = 63/123 (51.22%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+QL+ N NY + GRAIG D LN+P+ ++ D ISFK+A WFWMT H+V+ G+ ING ECG QV DR+ Y YC GV G+ L+C Sbjct: 187 RGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDC 309 The following BLAST results are available for this feature:
BLAST of CB304826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304826 ID=CB304826; Name=CB304826; organism=Citrus sinensis; type=EST; length=467bpback to top |