CB304830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11 Identity = 37/114 (32.46%), Postives = 62/114 (54.39%), Query Frame = -3 Query: 226 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPC 567 +F NV +W++E++ +A ++ +++GNK DL + V T A+ YA+ G+ F+ETSA + NVE+AF + SEI KK +P ++ + G + KK C Sbjct: 95 SFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEI-----KKLQGGIQPNNNSTYNAHVVKPTGFTPIGKKKKC 203
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = -3 Query: 265 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIV 567 +F NV +WL E+ +A N+ +++GNK+DL + V A+++A+ G+ F+ETSA A NVE+AF T+ +EI K+ + +P P+ K G +V Sbjct: 95 SFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI------KNRMASQPIPT--KAGGPVV 187
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB39B_MOUSE (Ras-related protein Rab-39B OS=Mus musculus GN=Rab39b PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 34/89 (38.20%), Postives = 54/89 (60.67%), Query Frame = -3 Query: 304 TFENVSRWLKELRDHADS-NIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE 567 +F+NV WL+E + H IV +++G+K DL R V +A+ A G+ +IETSA +AINVEKAF + +IY ++ + ++ E Sbjct: 96 SFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQE 184
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB39B_HUMAN (Ras-related protein Rab-39B OS=Homo sapiens GN=RAB39B PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 34/89 (38.20%), Postives = 54/89 (60.67%), Query Frame = -3 Query: 304 TFENVSRWLKELRDHADS-NIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE 567 +F+NV WL+E + H IV +++G+K DL R V +A+ A G+ +IETSA +AINVEKAF + +IY ++ + ++ E Sbjct: 96 SFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQE 184
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB39B_BOVIN (Ras-related protein Rab-39B OS=Bos taurus GN=RAB39B PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 34/89 (38.20%), Postives = 54/89 (60.67%), Query Frame = -3 Query: 304 TFENVSRWLKELRDHADS-NIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE 567 +F+NV WL+E + H IV +++G+K DL R V +A+ A G+ +IETSA +AINVEKAF + +IY ++ + ++ E Sbjct: 96 SFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGDITIQE 184
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB5A_DICDI (Ras-related protein Rab-5A OS=Dictyostelium discoideum GN=rab5A PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 43/115 (37.39%), Postives = 58/115 (50.43%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 +FE +W+KEL+ NIVI + GNK DL R V T +AQ YAE GL F+ETSA + NV + F I ++ + + + SG A + I G T K CC Sbjct: 96 SFERAIKWVKELQRQGSPNIVIALAGNKLDLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKLPKTPTTRP-GSGRVAIAPIDNGNT---------GKKNKCC 200
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 32/75 (42.67%), Postives = 51/75 (68.00%), Query Frame = -3 Query: 343 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 567 +F NV +WL+E+ +A N+ +++GNK+DL + V A+ YA++ G+ F+ETSA A NVE+AF T+ +EI Sbjct: 98 SFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEI 172
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 30/75 (40.00%), Postives = 48/75 (64.00%), Query Frame = -3 Query: 343 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 567 +F+N+ WL E++++A ++V+M++GNK D R V ED + A+ GL F+ETSA +NV+ AF I E+ Sbjct: 155 SFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKEL 229
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = -3 Query: 256 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSG-EPAPSNIKEGQTIVVGG 567 +F NV +WL+E+ +A N+ +++GNK DL + V A+ +A+ G+ F+ETSA A NVE+AF T+ +EI + + + S G E + NI+ GG Sbjct: 95 SFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEKSNVNIQSTPVKSSGG 199
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB19_MOUSE (Ras-related protein Rab-19 OS=Mus musculus GN=Rab19 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 42/118 (35.59%), Postives = 70/118 (59.32%), Query Frame = -3 Query: 226 TTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREG-LSFIETSALEAINVEKAFQTILSEIYRIISKKSLS-SGEPAPSNI-KEGQTIVVGGASEANTKKPC 570 +TFE+V W+ E+ + +N+VIM+IGNK+DL R V EDA + AE+ G L+ +ETSA E+ N+++ F + E +I++ SL GE A + ++ ++V +T+ C Sbjct: 103 STFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKE---LIARNSLHLYGESAQQGLSQDSSPVLVAQVPNESTRCTC 217 The following BLAST results are available for this feature:
BLAST of CB304830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304830 ID=CB304830; Name=CB304830; organism=Citrus sinensis; type=EST; length=575bpback to top |