CB304835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: RH11_ARATH (DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana GN=RH11 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.439e-14 Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = -2 Query: 426 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWI 650 ATDV ARG+D V V+N+D P+ Y+HRIGRTGRAG+SG A + E++ R++A LM+ + EVP W+ Sbjct: 464 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWL 538
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DBP2_CANGA (ATP-dependent RNA helicase DBP2 OS=Candida glabrata GN=DBP2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.439e-14 Identity = 35/76 (46.05%), Postives = 53/76 (69.74%), Query Frame = -2 Query: 423 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWIL 650 ATDV ARG+D KG+N V+NYD P + Y+HRIGRTGRAG +G AI+ +TED+ ++ ++M+ + +P ++ Sbjct: 413 ATDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLISIMREAKQNIPEELM 488
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: RH40_ARATH (DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana GN=RH40 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.103e-14 Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = -2 Query: 435 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVP 650 ATDV ARG+D K + VINYDFP Y+HRIGRTGRAG +G A T +TE D + ++ +++ + +VP Sbjct: 735 ATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVP 806
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: RH20_ORYSJ (DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica GN=Os01g0197200 PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.103e-14 Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = -2 Query: 438 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEV 650 ATDV ARG+D K V VINYDFP S Y+HRIGRTGRAG G A T +T + F +++ N+++ +G +V Sbjct: 392 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKV 462
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: RH52A_ORYSJ (DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica GN=Os06g0602400 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 9.277e-14 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -2 Query: 423 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWIL 650 ATDV +RG+D V VINYD P S Y+HRIGRTGRAG++G A +TE D + + LM + +VP W++ Sbjct: 407 ATDVASRGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVPDWLV 482
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: RH20_ARATH (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana GN=RH20 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.277e-14 Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = -2 Query: 438 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEV 650 ATDV ARG+D K V VINYDFP S Y+HRIGRTGRAG G A T +T + F + + N+++ +G +V Sbjct: 400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKV 470
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DRS1_MAGGR (ATP-dependent RNA helicase DRS1 OS=Magnaporthe grisea GN=DRS1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.277e-14 Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = -2 Query: 423 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWIL 650 ATD+ +RG+D KGV+ VINY+ P S Y+HR+GRT RAGRSG AITL E D ++ KA G ++ S I+ Sbjct: 556 ATDLASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKAGKAQGAKISSRII 631
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DBP3_ASPCL (ATP-dependent RNA helicase dbp3 OS=Aspergillus clavatus GN=dbp3 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.212e-13 Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = -2 Query: 393 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWILTL-PKLKGKKH 650 ATDV ARG+D V VIN FP + Y+HRIGRTGRAG G AITL+TE D + N++KA+ EVP +L +K K+H Sbjct: 394 ATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRTGRAGAEGRAITLFTETDKAQSGALINVLKAAKQEVPQELLKFGTTVKKKQH 480
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNE (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans GN=DBP2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.212e-13 Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = -2 Query: 435 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVP 650 ATDV +RG+D + + VINYDFP++ YIHRIGRTGRAGR G + T +T D+ R + +++ S ++P Sbjct: 412 ATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIP 483
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: RH40_ORYSJ (DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica GN=Os01g0549400 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = -2 Query: 351 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWILTLPKLKGKKHRPRRESISTKPKDG 650 ATDV ARG+D K + VINYDFP Y+HRIGRTGRAG +G A T + + D + ++ +++ + VP + + G+ R R + + G Sbjct: 450 ATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMASRGGRGGRKRNRWATRSDRGG 549 The following BLAST results are available for this feature:
BLAST of CB304835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 351
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304835 ID=CB304835; Name=CB304835; organism=Citrus sinensis; type=EST; length=651bpback to top |