CB304835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: EXP9_STRR6 (Probable ATP-dependent RNA helicase exp9 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=exp9 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = -2 Query: 363 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWILTLPKLKGKKHRPRRESISTK 650 ATDV ARG+D GV V NYD P +Y+HRIGRTGRAG+SG++IT +++ +L+ I NL K ++KG K ES +K Sbjct: 295 ATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQIIENLTK-------------KRMKGLKPASVEESFQSK 377
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: EXP9_STRPN (Probable ATP-dependent RNA helicase exp9 OS=Streptococcus pneumoniae GN=exp9 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = -2 Query: 363 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWILTLPKLKGKKHRPRRESISTK 650 ATDV ARG+D GV V NYD P +Y+HRIGRTGRAG+SG++IT +++ +L+ I NL K ++KG K ES +K Sbjct: 295 ATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQIIENLTK-------------KRMKGLKPASVEESFQSK 377
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DRS1_ASPOR (ATP-dependent RNA helicase drs1 OS=Aspergillus oryzae GN=drs1 PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = -2 Query: 423 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWIL 650 ATD+ ARG+D KGV VINY+ P S Y+HR+GRT RAGRSG A T+ E D ++ KA G +V S ++ Sbjct: 603 ATDLAARGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASKAQGAKVASRVV 678
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DDX3_DICDI (Probable ATP-dependent RNA helicase ddx3 OS=Dictyostelium discoideum GN=ddx3 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = -2 Query: 429 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSW 650 ATD+ +RG+ VN VIN+D P Y+HRIGRTGRAG+ G AI+ + E + P + LMKAS ++P W Sbjct: 560 ATDIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGLAISFFNEKNKPVGAELLKLMKASNQDIPDW 633
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DBP3_EMENI (ATP-dependent RNA helicase dbp3 OS=Emericella nidulans GN=dbp3 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = -2 Query: 393 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWILTL-PKLKGKKH 650 ATDV ARG+D V V+N FP + Y+HRIGRTGRAG G AITL+TE D + N++KA+ EVP +L +K K+H Sbjct: 379 ATDVAARGLDIPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETDKAQSGALINVLKAANQEVPEALLKFGSTVKKKQH 465
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DBP2_YEAST (ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae GN=DBP2 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 36/76 (47.37%), Postives = 51/76 (67.11%), Query Frame = -2 Query: 423 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWIL 650 ATDV ARG+D KG+N VINYD P + Y+HRIGRTGRAG +G AI+ +TE + + ++M+ + +P +L Sbjct: 416 ATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELL 491
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DBP2_YEAS7 (ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 36/76 (47.37%), Postives = 51/76 (67.11%), Query Frame = -2 Query: 423 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWIL 650 ATDV ARG+D KG+N VINYD P + Y+HRIGRTGRAG +G AI+ +TE + + ++M+ + +P +L Sbjct: 416 ATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELL 491
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DBP2_YARLI (ATP-dependent RNA helicase DBP2 OS=Yarrowia lipolytica GN=DBP2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = -2 Query: 456 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMK 650 ATDV +RG+D KG+N VINYD+P + Y+HRIGRTGRAG G A T +TED+ R++ +++ Sbjct: 419 ATDVASRGIDVKGINFVINYDYPSNSEDYVHRIGRTGRAGTKGTAYTYFTEDNRKQARDLLVILR 483
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DBP2_COCIM (ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis GN=DBP2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = -2 Query: 402 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWILTLPKLKG 650 ATDV +RG+D + + V+NYD+P++ Y+HRIGRTGRAG G AITL+T D+ R++ N++ S ++ + + + G Sbjct: 428 ATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTTDNAKQARDLVNILTESKQQIDPRLAEMARFGG 510
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: RH37_ORYSJ (DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica GN=PL10A PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-13 Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = -2 Query: 426 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWI 650 ATDV ARG+D V VIN+D P+ Y+HRIGRTGRAG+SG A + E ++ R + LM+ + EVP W+ Sbjct: 489 ATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNLSLARPLCELMQEANQEVPQWL 563 The following BLAST results are available for this feature:
BLAST of CB304835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 351
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304835 ID=CB304835; Name=CB304835; organism=Citrus sinensis; type=EST; length=651bpback to top |