CB304835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: PRP5_EMENI (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella nidulans GN=prp5 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-13 Identity = 42/101 (41.58%), Postives = 57/101 (56.44%), Query Frame = -2 Query: 348 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWILTLPKLKGKKHRPRRESISTKPKDGE 650 AT V ARG+D K + V+NYD P+ Y+HR GRTGRAG +G A+T TED + +IA +K SG EVP + L +K + +E S G+ Sbjct: 849 ATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQEVPEAVQKLVDSFLEKVKAGKEKASNSGFGGK 949
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DRS1_NEUCR (ATP-dependent RNA helicase drs-1 OS=Neurospora crassa GN=drs-1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = -2 Query: 423 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWIL 650 ATD+ +RG+D KGV+ VINY+ P + Y+HR+GRT RAGRSG AITL E D ++ K+ G ++ S I+ Sbjct: 594 ATDLASRGLDIKGVDTVINYEAPQTPEIYVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKAGKSQGAKISSRII 669
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DBP2_PICGU (ATP-dependent RNA helicase DBP2 OS=Pichia guilliermondii GN=DBP2 PE=3 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13 Identity = 36/76 (47.37%), Postives = 52/76 (68.42%), Query Frame = -2 Query: 423 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWIL 650 ATDV ARG+D KG++ VINYD P + Y+HRIGRTGRAG +G A++L+TE + ++ +M+ + VP +L Sbjct: 428 ATDVAARGIDVKGISYVINYDMPGNIEDYVHRIGRTGRAGTTGTAVSLFTEANSKLGGDLCKIMREANQTVPPELL 503
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DBP2_GIBZE (ATP-dependent RNA helicase DBP2 OS=Gibberella zeae GN=DBP2 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13 Identity = 34/83 (40.96%), Postives = 56/83 (67.47%), Query Frame = -2 Query: 402 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWILTLPKLKG 650 ATDV +RG+D + + V+NYD+P++ YIHRIGRTGRAG G AITL+T D+ R++ N+++ + ++ ++ + + G Sbjct: 437 ATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAMGTAITLFTTDNQKQARDLVNVLQEAKQQIDPRLVEMTRYGG 519
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DRS1_NEOFI (ATP-dependent RNA helicase drs1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=drs1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -2 Query: 423 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWIL 650 ATD+ +RG+D KGV VINY+ P S Y+HR+GRT RAGRSG A T+ E D +++ KA G ++ S ++ Sbjct: 600 ATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKIVKSAVKAGKAQGAKIVSRVV 675
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DRS1_CHAGB (ATP-dependent RNA helicase DRS1 OS=Chaetomium globosum GN=DRS1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = -2 Query: 423 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWIL 650 ATD+ +RG+D KG++ VINY+ P S Y+HR+GRT RAGRSG AITL E D ++ KA G ++ S ++ Sbjct: 571 ATDLASRGLDIKGIDTVINYEAPQSLEIYVHRVGRTARAGRSGVAITLAAEPDRKVVKAAVRAGKAQGAKIISRVI 646
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DRS1_ASPTN (ATP-dependent RNA helicase drs1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=drs1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -2 Query: 423 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWIL 650 ATD+ +RG+D KGV VINY+ P S Y+HR+GRT RAGRSG A T+ E D ++ KA G +V S ++ Sbjct: 605 ATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASKAQGAKVASRVV 680
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DRS1_ASPFU (ATP-dependent RNA helicase drs1 OS=Aspergillus fumigatus GN=drs1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -2 Query: 423 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWIL 650 ATD+ +RG+D KGV VINY+ P S Y+HR+GRT RAGRSG A T+ E D +++ KA G ++ S ++ Sbjct: 611 ATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKIVKSAVKAGKAQGAKIVSRVV 686
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DBP3_ASPNC (ATP-dependent RNA helicase dbp3 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp3 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13 Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = -2 Query: 393 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWILTL-PKLKGKKH 650 ATDV ARG+D V VIN FP + Y+HRIGRTGRAG G AITL+TE D + N++KA+ +VP +L +K K+H Sbjct: 386 ATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRTGRAGAEGHAITLFTEVDKAQSGALINVLKAANQDVPEDLLKFGATVKKKQH 472
BLAST of CB304835 vs. ExPASy Swiss-Prot
Match: DBP3_AJECN (ATP-dependent RNA helicase DBP3 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP3 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13 Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = -2 Query: 393 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRIGRTGRAGRSGEAITLYTEDDIPFLRNIANLMKASGCEVPSWILTL-PKLKGKKH 650 ATDV ARG+D V V+N FP + Y+HRIGRTGRAG G AIT++TE+D + N++K + ++P +L +K K+H Sbjct: 378 ATDVAARGLDIPAVKLVLNVTFPLTVEDYVHRIGRTGRAGSDGLAITMFTENDKALSGGLVNILKGANQDIPEALLKFGTTVKKKQH 464 The following BLAST results are available for this feature:
BLAST of CB304835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 351
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304835 ID=CB304835; Name=CB304835; organism=Citrus sinensis; type=EST; length=651bpback to top |