CB304861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_BACSU (Superoxide dismutase [Mn] OS=Bacillus subtilis GN=sodA PE=1 SV=5) HSP 1 Score: 88.1965 bits (217), Expect = 3.342e-17 Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = -2 Query: 301 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQK 588 FGS + ++ +A A GSGW WL ++ +L + +T NQD +++ T P+LG+DVWEHAYYL Y+N +PDY+ WNV+NW + +Y + Sbjct: 109 FGSFDKFKEQFAAAAAGRFGSGWAWLVVNNG--KLEITSTPNQDSPLSEGKT--PILGLDVWEHAYYLNYQNRRPDYISAFWNVVNWDEVARLYSE 200
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_ASPOR (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus oryzae GN=sodB PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 3.342e-17 Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 +GS+E + A LQGSGW WL + +L + +T +QDP+ K VP+ G+D+WEHAYYLQY N K Y++ +W V+NW+ A D ++ Sbjct: 109 YGSVEKFKEAFGATLLGLQGSGWGWLVANGPGGKLEIVSTKDQDPVTDK----VPVFGVDMWEHAYYLQYFNNKASYVEGIWKVLNWRTAEDRFK 199
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_STRAG (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae GN=sodA PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17 Identity = 42/95 (44.21%), Postives = 60/95 (63.16%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+NV+P+Y+K + ++NW +++YQ Sbjct: 107 FGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_STRA5 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype V GN=sodA PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17 Identity = 42/95 (44.21%), Postives = 60/95 (63.16%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+NV+P+Y+K + ++NW +++YQ Sbjct: 107 FGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_STRA3 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype III GN=sodA PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17 Identity = 42/95 (44.21%), Postives = 60/95 (63.16%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 FGS E +A GSGW WL ++ E K L V +TANQD + + P+LG+DVWEHAYYL Y+NV+P+Y+K + ++NW +++YQ Sbjct: 107 FGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGK-LEVLSTANQDTPIMEGKK--PILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQ 198
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_NEUCR (Superoxide dismutase [Mn], mitochondrial OS=Neurospora crassa GN=sod-2 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17 Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDT--EFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 +GS + + SA +QGSGW WL ++ E RL + TT +QDP+V VP+ G+D+WEHAYYLQY N K Y++N+W V+NWK A + +Q Sbjct: 138 WGSFDEFKKAFSAALLGIQGSGWGWLVKESTAEKGRLRIITTKDQDPVVGGE---VPVFGVDMWEHAYYLQYLNGKAAYVENIWKVINWKTAEERFQ 231
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_MYCPA (Superoxide dismutase [Mn] OS=Mycobacterium paratuberculosis GN=sodA PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17 Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = -2 Query: 328 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNW 588 FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 103 FGSFDKFRAQFSAAANGLQGSGWAVLGYDTVGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_HAEDU (Superoxide dismutase [Mn] OS=Haemophilus ducreyi GN=sodA PE=3 SV=4) HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17 Identity = 47/101 (46.53%), Postives = 63/101 (62.38%), Query Frame = -2 Query: 298 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQKE 588 FGS+EA + A GSGW WL L E +L V +TANQD P++ K V P+ +DVWEHAYYL Y+N +PDY+K WNV+NW AS ++++ Sbjct: 107 FGSVEAFQAEFEQAAATRFGSGWAWLVL--EEGKLAVVSTANQDSPIMGKDVAGVSGYPIFTLDVWEHAYYLHYQNRRPDYIKAFWNVVNWDEASRRFEEK 205
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM2_STAAB (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sodM PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.364e-17 Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 +G+L+ + + + L GSGW WL ++ +L + TT NQD +T+ T P+L DVWEHAYYL+Y+N +PDY+ WN++NWK ++YQ Sbjct: 106 WGTLDEFKNEFANKATTLFGSGWTWLVVNNG--KLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQNKRPDYMTAFWNIVNWKKVDELYQ 196
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_MYCSC (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium scrofulaceum GN=sodA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.700e-17 Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = -2 Query: 328 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNW 588 FGS + + SA LQGSGW LG DT RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 77 FGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 161 The following BLAST results are available for this feature:
BLAST of CB304861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304861 ID=CB304861; Name=CB304861; organism=Citrus sinensis; type=EST; length=592bpback to top |