CB304861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM2_CAEEL (Superoxide dismutase [Mn] 2, mitochondrial OS=Caenorhabditis elegans GN=sod-3 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 9.079e-23 Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = -2 Query: 313 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASD 588 FGSL+ L +++S A+QGSGW WLG + K L + T ANQDPL +VPL GIDVWEHAYYLQYKNV+PDY+ +W + NWK S+ Sbjct: 124 FGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKILKIATCANQDPL----EGMVPLFGIDVWEHAYYLQYKNVRPDYVHAIWKIANWKNISE 211
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_AGABI (Superoxide dismutase [Mn], mitochondrial OS=Agaricus bisporus GN=sod PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.686e-22 Identity = 47/94 (50.00%), Postives = 65/94 (69.15%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 FG L+ L ++ + A +QGSGW WLG++ KRL + TT NQDPL+ LVP++G+D+WEHA+YLQY NVK DYL +W+V+N+ A Y Sbjct: 102 FGGLDNLKKEFNTTTAGIQGSGWGWLGVNPSNKRLEISTTPNQDPLLN----LVPIIGVDIWEHAFYLQYLNVKADYLNAIWSVINFDEAQRRY 191
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_CHLMU (Superoxide dismutase [Mn] OS=Chlamydia muridarum GN=sodA PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.311e-21 Identity = 47/90 (52.22%), Postives = 66/90 (73.33%), Query Frame = -2 Query: 322 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKY 588 +GS + ++ + AA+QGSGW WL + + L+++TTANQDPL +A T ++PLLG+DVWEHAYYLQYKN + DYLKN +++NW Y Sbjct: 108 WGSFDNFLKNFISSSAAVQGSGWGWLAFCPKKQELMIQTTANQDPL--EATTGMIPLLGVDVWEHAYYLQYKNARLDYLKNFPSIINWDY 195
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_CHLTR (Superoxide dismutase [Mn] OS=Chlamydia trachomatis GN=sodA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.921e-21 Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = -2 Query: 322 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKY 588 +GS + ++ AA+QGSGW WL + + L+V+TTANQDPL +A T ++PLLG+DVWEHAYYLQYKN + DYLK+ +++NW Y Sbjct: 108 WGSFDNFLKNFITSSAAVQGSGWGWLAFCPQKQELMVQTTANQDPL--EATTGMIPLLGVDVWEHAYYLQYKNARMDYLKSFPSIINWDY 195
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_CAVPO (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Cavia porcellus GN=SOD2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.229e-20 Identity = 46/85 (54.12%), Postives = 58/85 (68.24%), Query Frame = -2 Query: 334 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVM 588 FGS + +K++A +QGSGW WLG + E L + +NQDPL L+PLLGIDVWEHAYYLQ KNV+PDYLK +W V+ Sbjct: 125 FGSFDKFKEKLTAVSVGVQGSGWGWLGFNKERGCLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQLKNVRPDYLKAIWKVI 208
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_CHLPN (Superoxide dismutase [Mn] OS=Chlamydia pneumoniae GN=sodA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.217e-20 Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = -2 Query: 301 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQK 588 +G+++ ++K+ A +QGSGW WLG + LV++ TANQDPL L PLLG+DVWEHAYYLQYKNV+ DYLK ++NW + + + + Sbjct: 108 WGTMDNFLKKLIEVAAGVQGSGWAWLGFCPAKQELVLQATANQDPLEPLTGKL-PLLGVDVWEHAYYLQYKNVRMDYLKAFPQIINWGHIENRFSE 202
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_CANAL (Superoxide dismutase [Mn], mitochondrial OS=Candida albicans GN=SOD2 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.395e-20 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = -2 Query: 319 FGSLEALIQKMSAEGAALQGSGWVWLGLD-TEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYA 588 FGSL+ LI+ + + A +QGSGW ++ + + V TTANQD + P LVPL+ ID WEHAYYLQY+NVK DY KN+W+V+NWK A Sbjct: 140 FGSLDKLIEITNGKLAGIQGSGWAFIVKNKANGDTIDVITTANQDTVTD--PNLVPLIAIDAWEHAYYLQYQNVKADYFKNLWHVINWKEA 228
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_SCHPO (Superoxide dismutase [Mn], mitochondrial OS=Schizosaccharomyces pombe GN=sod2 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.227e-19 Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 +GSLE ++M+A A++QGSGW WL +D + L + TTANQD +V P ++GID WEHAYY QY+N K +Y K +WNV+NWK A Y Sbjct: 127 WGSLEDFQKEMNAALASIQGSGWAWLIVDKDGS-LRITTTANQDTIVKSKP----IIGIDAWEHAYYPQYENRKAEYFKAIWNVINWKEAESRY 215
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_DROME (Superoxide dismutase [Mn], mitochondrial OS=Drosophila melanogaster GN=Sod2 PE=2 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 1.227e-19 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = -2 Query: 301 SLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQK 582 SLE ++++ A+QGSGW WLG + + +L + NQDPL L+PL GIDVWEHAYYLQYKNV+P Y++ +W++ NW S +Q+ Sbjct: 119 SLEEFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQDPLEASTG-LIPLFGIDVWEHAYYLQYKNVRPSYVEAIWDIANWDDISCRFQE 211
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_STAXY (Superoxide dismutase [Mn/Fe] OS=Staphylococcus xylosus GN=sodA PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.663e-19 Identity = 43/94 (45.74%), Postives = 64/94 (68.09%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 +GSL+A ++ + + AA GSGW WL ++ L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 106 WGSLDAFKEEFADKAAARFGSGWAWLVVNNG--NLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWEKVDELY 195 The following BLAST results are available for this feature:
BLAST of CB304861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304861 ID=CB304861; Name=CB304861; organism=Citrus sinensis; type=EST; length=592bpback to top |