CB304861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_METTM (Superoxide dismutase [Fe] OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=sod PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12 Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = -2 Query: 325 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWK 588 FGS + ++ S + +GSGW L RL + + V P L+ +DVWEHAYY+ Y+NV+PDY++ WN++NWK Sbjct: 107 FGSFQRFKKEFSQAAVSAEGSGWAVLTYCQRTDRLFIMQVEKHN--VNVIPHFRILMVLDVWEHAYYIDYRNVRPDYVEAFWNIVNWK 192
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_PSEPU (Superoxide dismutase [Fe] OS=Pseudomonas putida GN=sodB PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12 Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 FGS + ++ + GSGW WL + + T PL T T PLL DVWEHAYY+ Y+N++P Y++ WN++NW + ++ ++ Sbjct: 101 FGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPL-TSGDT--PLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWAFVAEQFE 192
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_PSEPK (Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440) GN=sodB PE=3 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12 Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 FGS + ++ + GSGW WL + + T PL T T PLL DVWEHAYY+ Y+N++P Y++ WN++NW + ++ ++ Sbjct: 101 FGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPL-TSGDT--PLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWAFVAEQFE 192
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_PSEAE (Superoxide dismutase [Fe] OS=Pseudomonas aeruginosa GN=sodB PE=3 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12 Identity = 33/91 (36.26%), Postives = 50/91 (54.95%), Query Frame = -2 Query: 316 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYAS 588 FGS + ++ + GSGW WL + + T +PL T T PLL DVWEHAYY+ Y+N++P Y++ WN++NW + + Sbjct: 101 FGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGNPL-TSGDT--PLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWDFVA 188
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_ENTHI (Superoxide dismutase [Fe] OS=Entamoeba histolytica GN=SODB PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12 Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = -2 Query: 313 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASD 588 FG LE +K + + GSGW WL ++ + K +++T +P+ + PLL DVWEHAYY+ +N + YL++ WNV+NWK+ + Sbjct: 101 FGGLEEFKKKFTEKAVGHFGSGWCWL-VEHDGKLEIIDTHDAVNPMTNG---MKPLLTCDVWEHAYYIDTRNNRAAYLEHWWNVVNWKFVEE 188
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_ARATH (Superoxide dismutase [Fe], chloroplastic OS=Arabidopsis thaliana GN=SODB PE=1 SV=4) HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12 Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = -2 Query: 316 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKN-VWNVMNWKYAS 588 F S E ++ +A A G+GW WL E K VV+T +PLV + PLL IDVWEHAYYL ++N +PDY+K + N+++W+ S Sbjct: 114 FTSYEKFYEEFNAAAATQFGAGWAWLAYSNE-KLKVVKTPNAVNPLVLGS---FPLLTIDVWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVS 201
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 36/93 (38.71%), Postives = 50/93 (53.76%), Query Frame = -2 Query: 313 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLK-NVWNVMNWKYASD 588 FGS E ++ E GSGW WL RL + TAN + + PLL DVWEHAYY+ Y+N +PDY+ + +++NWK+ D Sbjct: 117 FGSFEGFCEQFKQEAVGQFGSGWAWLVYHDN--RLQIIKTANAGTPIANG--MKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVED 205
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_BABBO (Superoxide dismutase [Fe] OS=Babesia bovis GN=SODB PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 42/103 (40.78%), Postives = 53/103 (51.46%), Query Frame = -2 Query: 280 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQKECP*AWS 588 FGS A S A GSGW WL L + +V+T PL K PLL DVWEHAYY+ YKN + Y+ + WN++NW +A+ E P WS Sbjct: 101 FGSFSAFKTDFSNLLAGHFGSGWGWLVLKDDGTADIVQTHDAGSPL--KENLGRPLLCCDVWEHAYYIDYKNDRLSYINSWWNLVNWDFANK--NLEAPFKWS 199
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_STRCO (Superoxide dismutase [Fe-Zn] 1 OS=Streptomyces coelicolor GN=sodF1 PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 7.210e-12 Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 FGS +++ A QGSGW L + RL+VE + V + T P+L D WEHA+YLQYKN K D++ +W V+NW+ + Y+ Sbjct: 108 FGSFAGFRAQLTKAAATTQGSGWGVLAYEPLSGRLIVEQIYDHQGNVGQGST--PILVFDAWEHAFYLQYKNQKVDFIDAMWAVVNWQDVARRYE 200
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.417e-12 Identity = 37/93 (39.78%), Postives = 51/93 (54.84%), Query Frame = -2 Query: 313 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLK-NVWNVMNWKYASD 588 FGS E ++ E GSGW WL RL + TAN + A + PLL DVWEHAYY+ Y+N +PDY+ + +++NWK+ D Sbjct: 117 FGSFEEFCEQFKQEAVGQFGSGWAWLIYHDN--RLQIIKTANAGTPI--AHGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVED 205 The following BLAST results are available for this feature:
BLAST of CB304861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304861 ID=CB304861; Name=CB304861; organism=Citrus sinensis; type=EST; length=592bpback to top |