CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_KOSOT (50S ribosomal protein L14 OS=Kosmotoga olearia (strain TBF 19.5.1) GN=rplN PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12 Identity = 38/99 (38.38%), Postives = 65/99 (65.66%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK + +I V G R + +GD+V+A+V++ P D++K ++ AV+VR +K RR DG ++ F+DNA VI++ + + KG+ + GP+ +E Sbjct: 11 ADNSGAKVIKVIQVSGGSKR----KTGSIGDIVVASVREAVPNTDIKKGDIVRAVVVRTKKEIRRPDGTYIRFDDNAAVIIDKQNQPKGTRVFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_FLAJ1 (50S ribosomal protein L14 OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=rplN PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G G R S VGD ++ ++K P+ K V AV+VR +K RR DG ++ F+DNA V++N GEM+G+ + GP+ +E Sbjct: 11 ADNTGAKEVLTIRVLG--GTKRRYAS--VGDKIVVSIKDATPNGNVKKGAVSTAVVVRTKKEVRRADGSYIRFDDNACVLLNAAGEMRGTRVFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CORA7 (50S ribosomal protein L14 OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=rplN PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12 Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ L +I V G G + R A +GD+V+ATVK+ P K ++ AVIVR +K RR DG ++ F++NA VI+ E +G+ I GP+ +E D Sbjct: 11 ADNSGARELLVIRVLG--GSVRRF--AGIGDIVVATVKEAIPGGNVKEGDIVKAVIVRAKKETRRPDGSYIAFDENAAVILKGDNEPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_AMOA5 (50S ribosomal protein L14 OS=Amoebophilus asiaticus (strain 5a2) GN=rplN PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12 Identity = 42/102 (41.18%), Postives = 63/102 (61.76%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + I V G G R S VGD ++ +VK P +++K V AV+VR +K RRKDG ++ F+DNA V++ E++G+ I GP+ +E Sbjct: 8 LNVADNSGAKQVQCIRVLG--GTKKRYAS--VGDRIVVSVKSASPAGNIKKGAVSKAVVVRTKKEVRRKDGSYIRFDDNAAVLLQNNDELRGTRISGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SULNB (50S ribosomal protein L14 OS=Sulfurovum sp. (strain NBC37-1) GN=rplN PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12 Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + I V G G R S VGD+++A+VKK P + KV+ AV+VR +K +R++G + F+DNA VI++ K E G+ I GP+ +E Sbjct: 8 LNVADNSGAKEIMCIKVLG--GSKRRYAS--VGDVIVASVKKALPTGKVKKGKVVKAVVVRTKKEIQRENGSLIRFDDNAAVIIDDKKEPIGTRIFGPVSRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_LAWIP (50S ribosomal protein L14 OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=rplN PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12 Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = -3 Query: 245 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 559 + V +T+ ADN+GAK + I V G G R A VGD+++ +VK+ P + K V+ AVIVR +K RR DG ++ F+ NA V+++ +GE G+ I GP+ +E Sbjct: 2 IQVESTLQVADNSGAKKVACIKVLG--GSKRRY--ATVGDIIVVSVKEAIPHSKVKKGEVLQAVIVRTKKEVRRMDGSYIKFDSNAAVLLSKQGEPVGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_LACSS (50S ribosomal protein L14 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rplN PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12 Identity = 40/102 (39.22%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ + I V G GR +A +GD+++AT+K+ P + +V+ AVIVR + RR DG ++ F++NA VI+N KG+ I GP+ +E D Sbjct: 11 ADNSGAREILTIKVLGGSGR----KTANIGDVIVATIKQATPGGVVKKGEVVKAVIVRTKSGARRVDGSYIKFDENAAVIINDDKTPKGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_DESDG (50S ribosomal protein L14 OS=Desulfovibrio desulfuricans (strain G20) GN=rplN PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = -3 Query: 245 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 559 + V + + ADN+GAK + I V G G R S VGD+++ +VK+ P + K VM AV+VR K RR DG ++ F+ NA V++N +GE G+ I GP+ +E Sbjct: 2 IQVESALQVADNSGAKKVACIKVLG--GSKRRYAS--VGDVIVVSVKEALPHSKVKKGDVMKAVVVRTAKEIRRNDGSYIKFDTNAAVLLNKQGEPVGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CORU7 (50S ribosomal protein L14 OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=rplN PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12 Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPK-GEMKGSAIPGPIGKE 541 V ADN+GA+ + +I V G G + R SA +GD+V+ATVK+ P +++ AVIVR +KP RR DG ++ F++NA VI+ + +G+ I GP+ +E Sbjct: 8 VRVADNSGAREILVIRVLG--GSVKR--SAGIGDVVVATVKEAAPGGTVKENEIVRAVIVRTKKPTRRPDGSYIAFDENAAVIIKANDNDPRGTRIFGPVARE 106
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CHLTE (50S ribosomal protein L14 OS=Chlorobium tepidum GN=rplN PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12 Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK + I V G GR A +GD +M +VK P +K V AV+VR K +RKDG ++ F++NA V++N +GE +G+ I GP+ +E D Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----AALGDQIMVSVKAAVPGGVVKKKDVCKAVVVRCVKEQKRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPVARELRD 108 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |