CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_PLAOC (50S ribosomal protein L14, chloroplastic OS=Platanus occidentalis GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 37/106 (34.91%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ + G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNMPLERSEVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_PAUCH (50S ribosomal protein L14, organellar chromatophore OS=Paulinella chromatophora GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + I V G R A VGD+++A VK P++ K V+ AVIVR + RR+ G + F+DNA VI+N KG+ + GP+ +E Sbjct: 8 LNVADNSGAKRIQCIRVLGSNRRY-----AHVGDIIVAAVKDAMPNMSVKKSDVVKAVIVRTKATLRRETGNSIRFDDNAAVIINDDKNPKGTRVFGPVARE 104
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_PANGI (50S ribosomal protein L14, chloroplastic OS=Panax ginseng GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 37/106 (34.91%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ + G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNMPLARSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_DRIGR (50S ribosomal protein L14, chloroplastic OS=Drimys granadensis GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 37/106 (34.91%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ + G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNMPLQRSEVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_CHAVU (50S ribosomal protein L14, chloroplastic OS=Chara vulgaris GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 35/102 (34.31%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GA+ L I + + A +GD ++A VK+ P++ + +++ AV+VR RK +R+ G+ + F+DNA VI+N G +G+ + GP+ +E Sbjct: 8 LNVADNSGARKLMCIRILNS----SNCKYANIGDTIIAVVKEAIPNMSIKKSEIVKAVVVRTRKGIKRQSGITIRFDDNAAVIINQDGNPRGTRVFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SYNJB (50S ribosomal protein L14 OS=Synechococcus sp. GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGA+ + I V G GR A +GD+++ VK P++ K V+ AV++R RR DG+ + F+DNA VI+N G +G+ + GP+ +E Sbjct: 11 ADNTGARKMMCIRVLGSSGRRY----ASLGDVIIGVVKDALPNMPVKKSDVVKAVVIRTVDTVRRPDGMCIRFDDNAAVIINNDGNPRGTRVFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_MYCS2 (50S ribosomal protein L14 OS=Mycobacterium smegmatis GN=rplN PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G R A +GD+++ATVK P R V+ AV+VR K RR DG ++ F++NA VI+ + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----AGIGDVIVATVKDAIPGGNVKRGDVVKAVVVRTVKERRRADGSYIKFDENAAVIIKNDNDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_LACH4 (50S ribosomal protein L14 OS=Lactobacillus helveticus (strain DPC 4571) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GA+ L +I V G R + +GD+V+ TVK+ P + V+ AVIVR + RR+DG ++ F++NAGVI+N +G+ I GP+ +E Sbjct: 11 ADNSGARELLVIRVLGGSKR----KTGNIGDIVVCTVKQATPGGVVKKGDVVKAVIVRTKSGARREDGSYIKFDENAGVIINADKSPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_LACAC (50S ribosomal protein L14 OS=Lactobacillus acidophilus GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GA+ L +I V G R + +GD+V+ TVK+ P + V+ AVIVR + RR+DG ++ F++NAGVI+N +G+ I GP+ +E Sbjct: 11 ADNSGARELLVIRVLGGSKR----KTGNIGDIVVCTVKQATPGGVVKKGDVVKAVIVRTKSGARREDGSYIKFDENAGVIINADKSPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_GEMAT (50S ribosomal protein L14 OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = -3 Query: 245 ATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 547 + V ADN+GAK +I V G G R A +GD V+ VK P+ + V AV+VR K RRKDG ++ F++NA VI+N GE K + I GP+ +E Sbjct: 6 SVVKVADNSGAKRALVIRVLG--GTRRRY--AGLGDRVIVAVKDALPNGTVKKSDVAKAVVVRTVKETRRKDGSYIRFDENAVVIINDNGEPKATRIFGPVARE 105 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |