CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_SACOF (50S ribosomal protein L14, chloroplastic OS=Saccharum officinarum GN=rpl14 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.172e-13 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR RK ++ DG+ + ++DNA VI++ KG KG+ + G + +E +L Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIIAVIKDAVPQMPLERSEVIRAVIVRTRKEFKGDDGIIIRYDDNAAVIIDQKGNPKGTRVFGAVAEELREL 110
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_SACHY (50S ribosomal protein L14, chloroplastic OS=Saccharum hybrid GN=rpl14 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.172e-13 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR RK ++ DG+ + ++DNA VI++ KG KG+ + G + +E +L Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIIAVIKDAVPQMPLERSEVIRAVIVRTRKEFKGDDGIIIRYDDNAAVIIDQKGNPKGTRVFGAVAEELREL 110
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_NEPOL (50S ribosomal protein L14, chloroplastic OS=Nephroselmis olivacea GN=rpl14 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.172e-13 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ L I V G + R A +GD+++A VK P++ K V+ AV+VR KP RR G+ + F+DNA VIVN +G +G+ + GP+ +E D Sbjct: 11 ADNSGARQLMCIRVLGGRKRY-----ASIGDVIIAVVKDAIPNMPVKKSDVVRAVVVRTSKPVRRDTGMLIRFDDNAAVIVNQEGNPRGTRVFGPVARELRD 107
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_MAIZE (50S ribosomal protein L14, chloroplastic OS=Zea mays GN=rpl14 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 9.172e-13 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR RK ++ DG+ + ++DNA VI++ KG KG+ + G + +E +L Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIIAVIKDAVPQMPLERSEVIRAVIVRTRKEFKGDDGIIIRYDDNAAVIIDQKGNPKGTRVFGAVAEELREL 110
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_BIGNA (50S ribosomal protein L14, chloroplastic OS=Bigelowiella natans GN=rpl14 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.172e-13 Identity = 43/105 (40.95%), Postives = 67/105 (63.81%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 V DN+GAK + I V G KGR N+L + +GD+++ VK+ P+ K ++ AV+VR RK +RK+G+++ F+DNA VIVN + +G+ I GP+ +E D Sbjct: 8 VKVVDNSGAKEIVCIRVLG-KGR-NQLSN--IGDIIIGVVKEAIPNTPLKKSDIVRAVVVRTRKGLKRKNGIYIRFDDNAAVIVNKENNPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PROA2 (50S ribosomal protein L14 OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=rplN PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK + I V G GR A +GD +M TVK P +K V AV+VR K +RKDG ++ F++NA V++N +GE +G+ I GP+ +E D Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----AAIGDQIMVTVKAAVPGGVVKKKDVCKAVVVRCAKEKKRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_HELMI (50S ribosomal protein L14 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplN PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12 Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = -3 Query: 236 DNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 529 DNTGAK L I V G G R S VGD+++A+VK+ P + V+ AV+VR RKP +R DG ++ F +NA VI+N + KG+ I GP+ +E D Sbjct: 12 DNTGAKELLCIRVLG--GSYRRYAS--VGDIIVASVKEATPGGVVKKGDVVKAVVVRTRKPIKRPDGSYIRFSENAAVIINEQKNPKGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_SORBI (50S ribosomal protein L14, chloroplastic OS=Sorghum bicolor GN=rpl14 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR RK ++ DG+ + ++DNA VI++ KG KG+ + G + +E +L Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIIAVIKDAVPKMPLERSEVIRAVIVRTRKEFKGDDGIIIRYDDNAAVIIDQKGNPKGTRVFGAVAEELREL 110
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_PSINU (50S ribosomal protein L14, chloroplastic OS=Psilotum nudum GN=rpl14 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12 Identity = 38/105 (36.19%), Postives = 64/105 (60.95%), Query Frame = -3 Query: 224 DNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADLWPR 529 DN+GA+ L I + G N A GD ++A VK+ P++ + +++ AVIVR RK +R +G+ + F+DNA V++N +G +KG+ + GP+ +E LW + Sbjct: 12 DNSGARKLMCIRILGT----NNCKYANTGDTIIAVVKESVPNMPVKKSEIVRAVIVRTRKEMKRDNGIIIRFDDNAAVVINREGNLKGTRVHGPVDRE---LWKK 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_PHATR (50S ribosomal protein L14, chloroplastic OS=Phaeodactylum tricornutum GN=rpl14 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12 Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + I V G + A +GD ++A VK+ P++ R V+ AV+VR +K RR+DG+++ F+DNA VIVN +G+ + GP+ +E D Sbjct: 11 ADNTGAKKVMCIRVLGGNKKY-----AKIGDTIIAVVKEALPNMPVKRSDVVRAVVVRTKKSIRRQDGMYIRFDDNAAVIVNMDNNPRGTRVFGPVAREIRD 107 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |