CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_CITSI (50S ribosomal protein L14, chloroplastic OS=Citrus sinensis GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P+ R +V+ AVIVR K RR +G+ + ++DNA V+++ +G KG+ + G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNTPLERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_CALFG (50S ribosomal protein L14, chloroplastic OS=Calycanthus floridus var. glaucus GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 37/106 (34.91%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ + G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNMPLERSEVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRKL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_AMBTC (50S ribosomal protein L14, chloroplastic OS=Amborella trichopoda GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++P+G KG+ + G I E L Sbjct: 8 LNVADNSGARELMCIRIVGASNPRY----AHIGDVIVAVIKEAVPNMPLERSEVIRAVIVRTCKELKRDNGIIIRYDDNAAVVIDPEGNPKGTRVFGSIAGELRHL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_ACOCL (50S ribosomal protein L14, chloroplastic OS=Acorus calamus GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.573e-11 Identity = 37/106 (34.91%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ + G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNMSLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRHL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_STRSV (50S ribosomal protein L14 OS=Streptococcus sanguinis (strain SK36) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ + I V G GR A +GD+++A+VK+ P K V+ AVIVR + RRKDG ++ F++NA VI+ +G+ I GP+ +E D Sbjct: 11 ADNSGAREILTIKVLGGSGR----KFANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKSGARRKDGSYIKFDENAAVIIREDKTPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_STRGC (50S ribosomal protein L14 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ + I V G GR A +GD+++A+VK+ P K V+ AVIVR + RRKDG ++ F++NA VI+ +G+ I GP+ +E D Sbjct: 11 ADNSGAREILTIKVLGGSGR----KFANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKSGARRKDGSYIKFDENAAVIIREDKTPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_MYCA5 (50S ribosomal protein L14 OS=Mycoplasma arthritidis (strain 158L3-1) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = -3 Query: 236 NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 538 N ADN+GAK + II K + G + R S +GD+V+ TVKK P +V+ AVIVR ++ R++G + F+DNA V++ G ++G+ + GP+ +E D Sbjct: 9 NVADNSGAKEVMII--KNLGGSIVR--STNIGDVVVVTVKKAIPHGFVKEGQVLKAVIVRTKRGLMRENGSHIRFDDNAVVLIKEDGTLRGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_LACCB (50S ribosomal protein L14 OS=Lactobacillus casei (strain BL23) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 39/102 (38.24%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ + +I V G R + +GD+V+ATVK+ P + V+ AVIVR + RR DG ++ F++NA VI+N +G+ I GP+ +E D Sbjct: 11 ADNSGAREILVIKVLGGSYR----KTGNIGDVVVATVKQATPGGVVKKADVVKAVIVRTKSGARRADGSYIKFDENAAVIINADKSPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_LACC3 (50S ribosomal protein L14 OS=Lactobacillus casei (strain ATCC 334) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 39/102 (38.24%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ + +I V G R + +GD+V+ATVK+ P + V+ AVIVR + RR DG ++ F++NA VI+N +G+ I GP+ +E D Sbjct: 11 ADNSGAREILVIKVLGGSYR----KTGNIGDVVVATVKQATPGGVVKKADVVKAVIVRTKSGARRADGSYIKFDENAAVIINADKSPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_GEOUR (50S ribosomal protein L14 OS=Geobacter uraniireducens (strain Rf4) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 ++ ADN+GAK L+ I V G R A +GD+++A+VK+ P+ + K V+ AV+VR K R DG ++ F+ N+GV++N + E G+ I GP+ +E Sbjct: 8 LDVADNSGAKKLFCIKVLGGSKR----KYAGIGDIIVASVKEAIPNSKVKKGDVVKAVVVRTAKEIGRPDGSYIRFDGNSGVVINNQKEPVGTRIFGPVARE 105 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |