CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_GEOTN (50S ribosomal protein L14 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ + +I V G GR A +GD+V+ATVK P + +V+ AV+VR ++ RR DG ++ F++NA VI+ +G+ I GP+ +E D Sbjct: 11 ADNSGAREVLVIKVLGGSGRRY----ANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRSDGSYIRFDENACVIIRDDKSPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_GEOSF (50S ribosomal protein L14 OS=Geobacter sp. (strain FRC-32) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 ++ ADN+GAK L+ I V G R A +GD+++A+VK+ P+ + K V+ AV+VR K R DG ++ F+ N+GV++N + E G+ I GP+ +E Sbjct: 8 LDVADNSGAKKLFCIKVLGGSKR----KYAGIGDIIVASVKEAIPNSKVKKGDVVKAVVVRTAKEIGRPDGSYIRFDGNSGVVINNQKEPVGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_EXIS2 (50S ribosomal protein L14 OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GA+ + I V G GR +A +GD+++ TVK+ P + +V+ AV+VR ++ RRKDG ++ F++NA VI+ +G+ I GP+ +E Sbjct: 11 ADNSGAREVLTIKVLGGSGR----KTANIGDVIVCTVKQATPGGVVKKGEVVRAVVVRTKRGVRRKDGSYIRFDENAAVIIKDDKSPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CORJK (50S ribosomal protein L14 OS=Corynebacterium jeikeium (strain K411) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPK-GEMKGSAIPGPIGKECAD 532 ADNTGA+ + +I G G + R SA +GD+V+ATVK+ P K ++ AVIVR +K RR DG ++ F++NA VI+ + +G+ I GP+ +E D Sbjct: 11 ADNTGAREILVIRPLG--GSVRR--SAGIGDVVVATVKEAAPGGTVKAGDIVKAVIVRAKKETRRPDGSYIAFDENAAVIIKANDNDPRGTRIFGPVARELRD 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CHLFF (50S ribosomal protein L14 OS=Chlamydophila felis (strain Fe/C-56) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R+ RKDG + F+ N+ VI++ KG KG+ I GPI +E D Sbjct: 11 ADNTGAKKVKCFKVLGG----SRRRYATVGDIIVCSVRDVEPDSSIKKGDVVKAVIVRTRRDILRKDGSSLRFDTNSCVIIDEKGNPKGTRIFGPIAREIRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CHLCV (50S ribosomal protein L14 OS=Chlamydophila caviae GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R+ RKDG + F+ N+ VI++ KG KG+ I GPI +E D Sbjct: 11 ADNTGAKKVKCFKVLGG----SRRRYATVGDIIVCSVRDVEPDSSIKKGDVVKAVIVRTRRDILRKDGSSLRFDTNSCVIIDEKGNPKGTRIFGPIAREIRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CHLAB (50S ribosomal protein L14 OS=Chlamydophila abortus GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R+ RKDG + F+ N+ VI++ KG KG+ I GPI +E D Sbjct: 11 ADNTGAKRVKCFKVLGG----SRRRYATVGDVIVCSVRDVEPDSSVKKGDVVKAVIVRTRRNILRKDGSSLKFDTNSCVIIDEKGNPKGTRIFGPIAREIRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CALS8 (50S ribosomal protein L14 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + I V G R A +GD+++ +VK P + V+ AVIVR RK RR+DG ++ F+DNA V++ +G+ I GP+ +E D Sbjct: 11 ADNTGAKEVMCIRVLGGSNR----KFANIGDIIVCSVKDATPGGVVKKGDVVKAVIVRTRKGIRREDGTYIRFDDNAAVLIREDKTPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_BACWK (50S ribosomal protein L14 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ L I V G GR A +GD+++ATVK+ P + V+ AV+VR + RR DG ++ F++NA VI+ +G+ I GP+ +E D Sbjct: 11 ADNSGARELLTIKVLGGSGR----KYAYIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKSGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_AQUAE (50S ribosomal protein L14 OS=Aquifex aeolicus GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + +I + + A +GD+V TVK+ P + K+ A+IVR K RR DG ++ F+DNA V++N GE G+ + GPI +E Sbjct: 8 LNVADNSGAKKVQVIGIPYAPRKY-----ATLGDVVTVTVKEALPQGNAKKGKIYRAIIVRTAKEVRRPDGSYIKFDDNACVLLNQYGEPLGTRVLGPIARE 104 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |