CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_ADICA (50S ribosomal protein L14, chloroplastic OS=Adiantum capillus-veneris GN=rpl14 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 5.377e-13 Identity = 39/108 (36.11%), Postives = 69/108 (63.89%), Query Frame = -3 Query: 245 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 559 + + + ++ ADN+GA+ L I V G R A +GD+++A VK+ P++ R +V+ AV+VR R+ +R++G+ + F+DNA VI+N +G +G+ I GP+ +E Sbjct: 2 IQIQSYLDVADNSGARKLMCIRVLGTGNR----KYADIGDIIIAVVKEAVPNMFLKRSEVVRAVVVRTRRGLKRRNGMVLEFDDNAAVIINQEGNPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SYNFM (50S ribosomal protein L14 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rplN PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.023e-13 Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK LY I V G G R S VGD+++ +VK+ P+ + K V+ AV+VR +K RR DG ++ F+DN+ V++N E G+ I GP+ +E Sbjct: 8 LNAADNSGAKRLYCIKVLG--GTRKRYAS--VGDIIVVSVKEAIPNAKVKKGDVLKAVVVRTQKEVRRPDGSYIKFDDNSAVLINQAKEPIGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SALTO (50S ribosomal protein L14 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=rplN PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.023e-13 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGA+ + I V G GR A +GD+++ATVK P K V+ AV+VR K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAREILCIRVLGGSGRRY----ASIGDVIVATVKDAIPGAGVKKGDVVKAVVVRTAKEKRRPDGSYIRFDENAAVIIKDGGDPRGTRIFGPVGRELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SALAI (50S ribosomal protein L14 OS=Salinispora arenicola (strain CNS-205) GN=rplN PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.023e-13 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGA+ + I V G GR A +GD+++ATVK P K V+ AV+VR K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAREILCIRVLGGSGRRY----ASIGDVIVATVKDAIPGAGVKKGDVVKAVVVRTAKEKRRPDGSYIRFDENAAVIIKDGGDPRGTRIFGPVGRELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_HERA2 (50S ribosomal protein L14 OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=rplN PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.023e-13 Identity = 46/99 (46.46%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK L I V G G R S VGD ++ATVK+ P K V+ AVIVR +K + R DG + F+DNA VI+N +G +G+ I GP+ +E Sbjct: 11 ADNTGAKELLCIRVLG--GTKRRYAS--VGDTIIATVKQANPGGSAKKGEVVRAVIVRVKKGYTRPDGSMIQFDDNAAVIINQQGNPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CHLPB (50S ribosomal protein L14 OS=Chlorobium phaeobacteroides (strain BS1) GN=rplN PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.023e-13 Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK + I V G GR A +GD +M TVK P +K+V AV+VR K RRKDG ++ F++NA V++N +GE +G+ I GP+ +E D Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----ASLGDQIMVTVKAAVPGGVVKKKEVTKAVVVRCAKEKRRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_SCEOB (50S ribosomal protein L14, chloroplastic OS=Scenedesmus obliquus GN=rpl14 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.023e-13 Identity = 43/105 (40.95%), Postives = 66/105 (62.86%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L I V G GR +A +GD+++A VK P++ K V+ AVIVR K RR++G+ + F+DNA V++N +G +G+ + GPI +E D Sbjct: 8 LNVADNSGARKLMCIRVLG-GGR----QTATIGDVIIAVVKDALPNMPLKKSDVVRAVIVRTSKGVRRENGMMLCFDDNAAVVINKEGNPRGTRVFGPIARELRD 107
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_PORPU (50S ribosomal protein L14, chloroplastic OS=Porphyra purpurea GN=rpl14 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.023e-13 Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPS-ACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ + I V G PS A +GD+++ VK P++ R V+ AV+VR RK RR DG+ + F+DNA VI+N +G+ + GPI +E D Sbjct: 8 LNVADNSGARKIMCIRVLGTSN-----PSYASIGDVIIGVVKDASPNMPVKRSDVVRAVVVRTRKALRRNDGMSIRFDDNAAVIINQDNNPRGTRVFGPIARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_UNCTG (50S ribosomal protein L14 OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=rplN PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.172e-13 Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISV-KGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GA+ + V KG+K R A +GD++ A+V+ P K V+ AV+VR K RR DG ++ F+DNA VI+N +GE KG+ I GP+ KE Sbjct: 8 LNVADNSGARKIRCFRVTKGLKRRY-----ASIGDVIHASVQDALPHANVKKGDVVKAVVVRTVKEIRRADGTYIKFDDNATVIINDEGEPKGTRIFGPVAKE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_KINRD (50S ribosomal protein L14 OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=rplN PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.172e-13 Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G GR A +GD+++ATVK P K V+ AVIVR +K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVIVRTKKERRRADGSYIRFDENAAVILRADGDPRGTRIFGPVGRE 105 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |