CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_MARPO (50S ribosomal protein L14, chloroplastic OS=Marchantia polymorpha GN=rpl14 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12 Identity = 39/102 (38.24%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GA+ L I V G R A +GD+++A VK+ P++ + +++ AVIVR K ++R +G + F+DNA V++N +G KG+ + GPI +E Sbjct: 8 LNVADNSGARKLMCIRVIGTSNR----KYANIGDIIIAVVKEAVPNMPIKKSEIVRAVIVRTCKEFKRNNGSIIKFDDNAAVVINQEGNPKGTRVFGPIARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_FAGEA (50S ribosomal protein L14, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=rpl14 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12 Identity = 40/106 (37.74%), Postives = 66/106 (62.26%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR RK +R++G+ + ++DNA VI++ KG KG+ + G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDIIVAVIKEAIPNMPLERSEVIRAVIVRTRKELKRENGMIIRYDDNAAVIIDQKGNPKGTRVFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_FRASN (50S ribosomal protein L14 OS=Frankia sp. (strain EAN1pec) GN=rplN PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.565e-12 Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGA+ + I V G GR A +GD+++ TVK P R V+ AV+VR +K RR DG ++ F++NA V++ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAREILCIRVLGGSGRRY----AGIGDIIVGTVKDALPGAGVKRGDVVKAVVVRTKKERRRPDGSYIRFDENAAVLIRDGGDPRGTRIFGPVGRELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_GRATL (50S ribosomal protein L14, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl14 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.565e-12 Identity = 40/111 (36.04%), Postives = 65/111 (58.56%), Query Frame = -3 Query: 236 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 559 + + + +N ADN+GA+ + I V G N A +GD+++ VK P++ + ++ AVIVR +K RR DG+ + F+DNA VI+N + +G+ + GPI KE D Sbjct: 2 IQIQSYLNIADNSGARKIMCIQVLGS----NNPHYANIGDIIIGVVKDALPNMPIKKSDIIRAVIVRTKKTIRRNDGMSIRFDDNAAVIINQENNPRGTRVFGPIAKELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CYAP8 (50S ribosomal protein L14 OS=Cyanothece sp. (strain PCC 8801) GN=rplN PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.043e-12 Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L + V G +GD+++A VK P++ R +++ AVIVR R+P RR G+ + F+DNA VI+N G KG+ + GP+ +E D Sbjct: 8 LNVADNSGARKLMCLRVLGT----GNCRYGEIGDVIIAVVKDAIPNMPIKRSEIVRAVIVRTRQPVRRASGMSIRFDDNAAVIINNDGNPKGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_THEAB (50S ribosomal protein L14 OS=Thermosipho africanus (strain TCF52B) GN=rplN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK L +I V G +R VGD+V+ +V+ P DL+K V+ AVIVR +K RR DG ++ F+DNA V+++ E KG+ + GP+ KE Sbjct: 8 LNVADNSGAKLLRVIRVMGG----SRRKWGTVGDVVVCSVRDAVPNGDLKKGDVVKAVIVRTKKEIRRPDGTYIRFDDNAAVVLDKYNEPKGTRVFGPVAKE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_STRGG (50S ribosomal protein L14 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=rplN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G GR A +GD+++ATVK P K V+ AVIVR K RR+DG ++ F++NA VI+ G+ +G+ I GP+G+E Sbjct: 11 ADNTGAKEILTIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVIVRTVKERRRQDGSYIRFDENAAVILKNDGDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SOLUE (50S ribosomal protein L14 OS=Solibacter usitatus (strain Ellin6076) GN=rplN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ L I +G G L A +GD+V A VK+ PD + KV+ VIVR RK RRKDG ++ F+ NA V++N GE G+ + GP+ +E D Sbjct: 11 ADNSGARRLSCILPRG--GDLGL--RAGLGDVVTAAVKEAAPDSAIKKGKVVRCVIVRMRKETRRKDGTYIRFDSNAAVLINDVGEPVGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_NOCSJ (50S ribosomal protein L14 OS=Nocardioides sp. (strain BAA-499 / JS614) GN=rplN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 44/99 (44.44%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G GR A +GD+++ATVK P K V+ AV+VR K RR DG ++ F++NA VI+ GE +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVVVRTVKERRRPDGSYIRFDENAAVILKNDGEPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CARHZ (50S ribosomal protein L14 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 41/108 (37.96%), Postives = 63/108 (58.33%), Query Frame = -3 Query: 245 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 559 + V +N ADNTGAK L I V G R A +GD+++ +VK+ PD + +V+ AV+VR +K RR DG ++ F++NA VI+ +G+ I GP+ +E Sbjct: 2 IQVQTILNSADNTGAKKLMCIRVLGGSNRRY----ASLGDIIVCSVKEATPDAVVKKGEVVKAVVVRTKKEVRRPDGTYIKFDENAAVIIKDDKSPRGTRIFGPVARE 105 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |