CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_PORYE (50S ribosomal protein L14, chloroplastic OS=Porphyra yezoensis GN=rpl14 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPS-ACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ + I V G PS A +GD+++ VK P++ R V+ AV+VR RK RR DG+ + F DNA VI+N +G+ + GPI +E D Sbjct: 8 LNVADNSGARKIMCIRVLGTSN-----PSYASIGDVIIGVVKDASPNMPVKRSDVVRAVVVRTRKALRRTDGMSIRFGDNAAVIINQDNNPRGTRVFGPIARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_TROWT (50S ribosomal protein L14 OS=Tropheryma whipplei (strain Twist) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL----RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK+L +I V G G R S +GD+V+A+VK P + V+ AVIVR K RR DG ++ F+DNA VI+ P + +G+ I GP+ +E D Sbjct: 11 ADNTGAKSLSVIRVLG--GSNRRFGS--LGDVVVASVKDAVPGSSAVKKGDVVKAVIVRSTKEVRRTDGSYIRFDDNAAVILRPDNDPRGTRIFGPVARELRD 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_TROW8 (50S ribosomal protein L14 OS=Tropheryma whipplei (strain TW08/27) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL----RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK+L +I V G G R S +GD+V+A+VK P + V+ AVIVR K RR DG ++ F+DNA VI+ P + +G+ I GP+ +E D Sbjct: 11 ADNTGAKSLSVIRVLG--GSNRRFGS--LGDVVVASVKDAVPGSSAVKKGDVVKAVIVRSTKEVRRTDGSYIRFDDNAAVILRPDNDPRGTRIFGPVARELRD 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_TRIEI (50S ribosomal protein L14 OS=Trichodesmium erythraeum (strain IMS101) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L I V G R A +GD+++A VK P++ K V+ AV+VR +K RR G+ + F+DNA VI+N G +G+ + GP+ +E D Sbjct: 8 LNVADNSGARKLMCIRVVGGGNRRY----AHIGDVIIAVVKDASPNMAVKKSDVVRAVVVRTKKGLRRDSGMSIRFDDNAAVIINQDGNPRGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SYNP6 (50S ribosomal protein L14 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 42/105 (40.00%), Postives = 61/105 (58.10%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L I V G R A VGD+++A VK P++ K V+ AV+VR +K RR G + F+DNA VI+N G +G+ + GP+ +E D Sbjct: 8 LNVADNSGARKLMCIRVLGSNRRY-----AGVGDVIIAVVKDALPNMPVKKSDVVRAVVVRTKKSLRRDSGNVIRFDDNAAVIINADGNPRGTRVFGPVARELRD 107
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SYNE7 (50S ribosomal protein L14 OS=Synechococcus elongatus (strain PCC 7942) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 42/105 (40.00%), Postives = 61/105 (58.10%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L I V G R A VGD+++A VK P++ K V+ AV+VR +K RR G + F+DNA VI+N G +G+ + GP+ +E D Sbjct: 8 LNVADNSGARKLMCIRVLGSNRRY-----AGVGDVIIAVVKDALPNMPVKKSDVVRAVVVRTKKSLRRDSGNVIRFDDNAAVIINADGNPRGTRVFGPVARELRD 107
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_RHOSR (50S ribosomal protein L14 OS=Rhodococcus sp. (strain RHA1) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G R A +GD+++ATVK P +++K +V+ AVIVR K RR DG ++ F++NA V++ P + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----AGIGDIIVATVKDAIPGGNIKKGEVVKAVIVRTTKERRRPDGSYIKFDENAAVLIKPDNDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_RHOOB (50S ribosomal protein L14 OS=Rhodococcus opacus (strain B4) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G R A +GD+++ATVK P +++K +V+ AVIVR K RR DG ++ F++NA V++ P + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----AGIGDIIVATVKDAIPGGNIKKGEVVKAVIVRTTKERRRPDGSYIKFDENAAVLIKPDNDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PROVI (50S ribosomal protein L14 OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK + I V G GR A +GD V+ +VK P +K+V AV+VR K RRKDG ++ F++NA V++N +GE +G+ I GP+ +E D Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----ASLGDQVIVSVKAAVPGGVVKKKEVCKAVVVRCAKELRRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_FRASC (50S ribosomal protein L14 OS=Frankia sp. (strain CcI3) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGA+ + I V G GR A +GD+++ TVK P R V+ AV+VR K RR DG ++ F++NA V++ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAREILCIRVLGGSGRRY----AGIGDIIVGTVKDALPGAGVKRGDVVKAVVVRTTKERRRPDGSYIRFDENAAVLIRDGGDPRGTRIFGPVGRELRD 108 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |