CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_FRAAA (50S ribosomal protein L14 OS=Frankia alni (strain ACN14a) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGA+ + I V G GR A +GD+++ TVK P R V+ AV+VR K RR DG ++ F++NA V++ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAREILCIRVLGGSGRRY----AGIGDIIVGTVKDALPGAGVKRGDVVKAVVVRTTKERRRPDGSYIRFDENAAVLIRDGGDPRGTRIFGPVGRELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_BRAHW (50S ribosomal protein L14 OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = -3 Query: 236 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 559 + V +T+N ADNTG K L I V G +R A +GD+++ +V P + KV+ AVIVR +K RR DG ++ F++NA VIV+ K E +G I GP+ +E D Sbjct: 2 IQVPSTLNVADNTGVKKLKCIKVLGG----SRRRYATLGDVIICSVTDIIPTCSIEKGKVVKAVIVRVKKEVRRPDGSYIRFDENAAVIVDDKKEPRGKRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_LEMMI (50S ribosomal protein L14, chloroplastic OS=Lemna minor GN=rpl14 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 38/106 (35.85%), Postives = 67/106 (63.21%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR RK +R++G+ + ++DNA V+++ +G KG+ + G I +E +L Sbjct: 8 LNVADNSGARELMCIRILGASNRRY----ANIGDVIVAVIKEAVPNMPLERSEVIRAVIVRTRKELKRENGMRIRYDDNAAVVIDQEGNPKGTRVFGAIARELREL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_THEM4 (50S ribosomal protein L14 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rplN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK L +I V G +R VGD+V+ +V+ P DL+K V+ AVIVR +K RR DG ++ F+DNA V+++ E KG+ + GP+ KE Sbjct: 8 LNVADNSGAKLLRVIRVMGG----SRRKWGTVGDIVVCSVRDAVPNGDLKKGDVVKAVIVRTKKEIRRPDGSYIRFDDNAAVVLDKYNEPKGTRVFGPVAKE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SULMW (50S ribosomal protein L14 OS=Sulcia muelleri (strain GWSS) GN=rplN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKK---GKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 + ADN+GAK + +I V G K A +GD ++ ++K+ G + ++ AV+VR +K RRKDG ++ F+DNA V++ GEMKG+ I GP+ +E D Sbjct: 8 IRVADNSGAKEVLLIRVLGGK------KYAYIGDTIIVSIKEAIAGSSVKKGQLYKAVVVRTKKKIRRKDGSYIRFDDNACVLLTNTGEMKGTRILGPVSRELRD 106
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_STRCO (50S ribosomal protein L14 OS=Streptomyces coelicolor GN=rplN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 44/99 (44.44%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G GR A +GD+++ATVK P K V+ AVIVR K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E Sbjct: 11 ADNTGAKEILTIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVIVRTVKERRRPDGSYIRFDENAAVILKNDGDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_STRAW (50S ribosomal protein L14 OS=Streptomyces avermitilis GN=rplN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 44/99 (44.44%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G GR A +GD+++ATVK P K V+ AVIVR K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVIVRTVKERRRPDGSYIRFDENAAVILKNDGDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_RUBXD (50S ribosomal protein L14 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rplN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GA++L I V G R SA +GD+++A+VK+ P K V+ AV+VR +K RR+DG ++ F +NAGV++N G +G+ I GP+ +E Sbjct: 11 ADNSGARSLLCIRVLGGSKRR----SAGIGDVIVASVKEATPGGAVKKGDVVRAVVVRTKKETRREDGSYIRFGENAGVLINSDGSPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_MYCLE (50S ribosomal protein L14 OS=Mycobacterium leprae GN=rplN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G R A +GD+++ TVK P R V+ AV+VR K RR DG ++ F++NA VI+ P + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----ASIGDVIVGTVKDAIPGGNVKRGDVVKAVVVRTAKECRRPDGSYIKFDENAAVIIKPDNDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CHLCH (50S ribosomal protein L14 OS=Chlorobium chlorochromatii (strain CaD3) GN=rplN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK + I V G GR A +GD V+ +VK P +K V AV+VR K RRKDG ++ F++NA VI+N +GE +G+ I GP+ +E D Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----ASLGDQVIVSVKTAVPGGIVKKKDVCKAVVVRAVKESRRKDGSYIRFDENAVVILNAQGEPRGTRIFGPVARELRD 108 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |