CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_AZOPC (50S ribosomal protein L14 OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=rplN PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12 Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = -3 Query: 245 DNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRKKVMP-AVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 529 DN+GAK + I V G G R S VGD+++ TVK P D++K ++ A+IVR +K RR+DG ++ F+DNA V++N GE++GS I GP+ +E Sbjct: 12 DNSGAKEVLCIRVLG--GTRRRYAS--VGDIIVVTVKTVVPSSDIKKGIVSKAIIVRVKKEIRREDGSYIRFDDNACVLLNSTGEIRGSRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_GOSHI (50S ribosomal protein L14, chloroplastic OS=Gossypium hirsutum GN=rpl14 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I V G R A +GD+++A +K+ P+ R +V+ AVIVR RK +R +G+ + ++DNA V+++ +G KG+ I G I +E L Sbjct: 8 LNVADNSGARELMCIRVIGASNRRY----AHIGDVIVAVIKEAVPNTPLERSEVIRAVIVRTRKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_GOSBA (50S ribosomal protein L14, chloroplastic OS=Gossypium barbadense GN=rpl14 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I V G R A +GD+++A +K+ P+ R +V+ AVIVR RK +R +G+ + ++DNA V+++ +G KG+ I G I +E L Sbjct: 8 LNVADNSGARELMCIRVIGASNRRY----AHIGDVIVAVIKEAVPNTPLERSEVIRAVIVRTRKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_CHLVU (50S ribosomal protein L14, chloroplastic OS=Chlorella vulgaris GN=rpl14 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGA+ L I V G G R +A VGD+++A VK P++ R ++ AVIVR RK RR +G + F++NA VI+N + +G+ + GP+ +E D Sbjct: 11 ADNTGARELMCIRVLG--GGKQR--AATVGDIIIAVVKDATPNMPVKRSDIVRAVIVRTRKNVRRVNGTSIRFDENAAVIINKENNPRGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_BRADI (50S ribosomal protein L14, chloroplastic OS=Brachypodium distachyon GN=rpl14 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR K ++ +DG+ + ++DNA VI++ KG KG+ + G I +E +L Sbjct: 8 LNVADNSGARKLMCIRVIGTAGNQRY---ARIGDVIVAVIKDAVPQMPLERSEVIRAVIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAITEELREL 110
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SULDN (50S ribosomal protein L14 OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=rplN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADNTGAK + I V G G R A VGD+++A+VKK P + K V+ AVIVR K R++G + F+DNA VI++ K E G+ I GPI +E Sbjct: 8 LNVADNTGAKEVMCIKVLG--GSKRRY--AQVGDVIIASVKKATPTAKVKKGKVVKAVIVRTAKEIHRENGSLIRFDDNAAVILDDKREPIGTRIFGPIARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PELPD (50S ribosomal protein L14 OS=Pelobacter propionicus (strain DSM 2379) GN=rplN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 41/102 (40.20%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 ++ ADN+GAK L+ I V G R A VGD+++A+V++ P+ + K V+ AVIVR K R DG ++ F+DN+GV++N + E G+ I GP+ +E Sbjct: 8 LDVADNSGAKKLFCIKVLGGSKR----KYAGVGDIIVASVREALPNSKVKKGDVVKAVIVRTAKELGRPDGSYIRFDDNSGVVINNQKEPVGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_NITSB (50S ribosomal protein L14 OS=Nitratiruptor sp. (strain SB155-2) GN=rplN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 43/102 (42.16%), Postives = 65/102 (63.73%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + I V G G R S VGD+++A+VKK P+ + K V+ AV+VR +K +R++G + F+DNA VI++ K E G+ I GP+ +E Sbjct: 8 LNVADNSGAKEIMAIKVLG--GSKRRYAS--VGDVIVASVKKALPNGKVKKGQVVKAVVVRTKKEIQRENGSLIRFDDNAAVILDNKNEPIGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_MYCGI (50S ribosomal protein L14 OS=Mycobacterium gilvum (strain PYR-GCK) GN=rplN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G GR A +GD+++ATVK P R V+ AVIVR K RR DG ++ F++NA VI+ + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKRGDVVKAVIVRTVKERRRADGSYIRFDENAAVIIKNDNDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CYAP7 (50S ribosomal protein L14 OS=Cyanothece sp. (strain PCC 7424) GN=rplN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L + V G +GD ++A VK P++ K V+ AVIVR R P RR G+ + F+DNA VI+N G KG+ + GP+ +E D Sbjct: 8 LNVADNSGARKLMCLRVLGT----GNCRYGGIGDEIIAVVKDAIPNMPVKKSDVVKAVIVRTRHPLRRASGMTIRFDDNAAVIINNDGNPKGTRVFGPVARELRD 108 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |