CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CORDI (50S ribosomal protein L14 OS=Corynebacterium diphtheriae GN=rplN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGA+ + I V G G R A +GD+++ATVK+ P K V+ AVIVR +K RR DG ++ F++NA V++ E +G+ I GP+ +E D Sbjct: 11 ADNTGAREILCIRVLG--GSTRRF--AGIGDVIVATVKEATPGGNVKAGEVVKAVIVRAKKETRRPDGSYIKFDENAAVLIKNDNEPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CHLL2 (50S ribosomal protein L14 OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=rplN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK + I V G GR A +GD V+ +VK P +K V AV+VR K RRKDG ++ F++NA V++N +GE +G+ I GP+ +E D Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----AGLGDQVIVSVKAAVPGGVVKKKDVCKAVVVRCAKEQRRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_BACTN (50S ribosomal protein L14 OS=Bacteroides thetaiotaomicron GN=rplN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = -3 Query: 245 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 559 + V + + DN+GAK I V G GR A VGD+++ +VK P D++K V A+IVR +K RR DG ++ F+DNA V++N GE++GS I GP+ +E Sbjct: 2 IQVESRLTVCDNSGAKEALCIRVLGGTGRRY----ASVGDVIVVSVKSVIPSSDVKKGAVSKALIVRTKKEIRRPDGSYIRFDDNACVLLNNAGEIRGSRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_BACFR (50S ribosomal protein L14 OS=Bacteroides fragilis GN=rplN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = -3 Query: 245 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 559 + V + + DN+GAK I V G GR A VGD+++ +VK P D++K V A+IVR +K RR DG ++ F+DNA V++N GE++GS I GP+ +E Sbjct: 2 IQVESRLTVCDNSGAKEALCIRVLGGTGRRY----ASVGDVIVVSVKSVIPSSDVKKGAVSKALIVRTKKEIRRPDGSYIRFDDNACVLLNNAGEIRGSRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_BACFN (50S ribosomal protein L14 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=rplN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = -3 Query: 245 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 559 + V + + DN+GAK I V G GR A VGD+++ +VK P D++K V A+IVR +K RR DG ++ F+DNA V++N GE++GS I GP+ +E Sbjct: 2 IQVESRLTVCDNSGAKEALCIRVLGGTGRRY----ASVGDVIVVSVKSVIPSSDVKKGAVSKALIVRTKKEIRRPDGSYIRFDDNACVLLNNAGEIRGSRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_ANATD (50S ribosomal protein L14 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rplN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + I V G R A +GD+++ +VK P + V+ AVIVR RK RR+DG ++ F+DNA V++ G +G+ I GP+ +E D Sbjct: 11 ADNTGAKEVMCIRVLGGSNR----KFANIGDVIVCSVKDATPGGVVKKGDVVKAVIVRTRKGVRREDGTYIRFDDNAAVLIREDGTPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_WHEAT (50S ribosomal protein L14, chloroplastic OS=Triticum aestivum GN=rpl14 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR K ++ +DG+ + ++DNA VI++ KG KG+ + G I +E L Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIVAVIKDALPQMPLERSEVIRAVIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELRGL 110
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_CYAPA (50S ribosomal protein L14, cyanelle OS=Cyanophora paradoxa GN=rpl14 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 + ADN+GA+ L I V G R A +GD+++A VK G P++ + + AVIVR RK +R +G+ + F+DNA VI+N G +G+ + GP+ +E D Sbjct: 8 LTAADNSGARKLMCIRVLGGGNRRY----ARIGDVIVAVVKDGIPNIPIKKSDTVKAVIVRTRKELKRDNGMNICFDDNAAVIINADGNPRGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_CUSRE (50S ribosomal protein L14, plastid OS=Cuscuta reflexa GN=rpl14 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 38/102 (37.25%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR RK +R +G+ + ++DNA V+++ +G KG+ I G I +E Sbjct: 8 LNVADNSGARELMCIQIIGASNRRY----AHIGDIIVAVIKEAVPNMPLERSEVVRAVIVRTRKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIPRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_TREPS (50S ribosomal protein L14 OS=Treponema pallidum subsp. pallidum (strain SS14) GN=rplN PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.324e-11 Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = -3 Query: 233 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 559 + V + +N ADN+GA+ + I V G +R A VGD+++ VK P + V AVIVR K +RR DG ++ F+DNA V+++ G KG I GP+ +E D+ Sbjct: 2 IQVQSRLNVADNSGARLVQCIKVVGG----SRRRYASVGDIIVVAVKDALPTSVIKKGSVEKAVIVRVSKEYRRVDGTYIRFDDNACVVIDANGNPKGKRIFGPVARELRDM 109 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |