CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_MYCPE (50S ribosomal protein L14 OS=Mycoplasma penetrans GN=rplN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD--LRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADNTGAK + +I V G G R S VGD+V+ +VKK +PD +RK +V AVIVR +K R G + F+DNA VI+ +GS I GP+ +E D Sbjct: 8 LNVADNTGAKQVGVIKVLG--GTKRRYAS--VGDIVVVSVKKAQPDGIVRKGQVCKAVIVRVKKNITRSSGNSLSFDDNACVIIKEDKTPRGSRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_MYCA9 (50S ribosomal protein L14 OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=rplN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + I V G R A +GD+++ATVK P R V+ AV+VR K RR DG ++ F++NA VI+ + +G+ I GP+G+E D Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----AGIGDIIVATVKDAIPGGTVKRGDVVKAVVVRTVKERRRPDGSYIKFDENAAVIIKADNDPRGTRIFGPVGRELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_LYSSC (50S ribosomal protein L14 OS=Lysinibacillus sphaericus (strain C3-41) GN=rplN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ + I V G GR +A +GD+V+ TVKK P + V+ AVIVR + RRKDG ++ F++NA VI+ +G+ I GP+ +E D Sbjct: 11 ADNSGAREVLTIKVLGGSGR----KTANIGDIVVCTVKKATPGGVVKKGDVVKAVIVRTKSGVRRKDGTYIKFDENACVIIRDDKSPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_HALOH (50S ribosomal protein L14 OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=rplN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGA+ L I V G +R A VGD+++ATVK+ PD + +V+ AV+VR +K RR DG ++ F++NA V+++ +G+ I GP+ +E Sbjct: 11 ADNTGARELLCIRVLGG----SRKRYAGVGDIIVATVKEAIPDGMVKKGEVVKAVVVRTKKETRRPDGSYIKFDENAAVLIDKANNPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_EUBR3 (50S ribosomal protein L14 OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=rplN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK L +I V G G R A +GD+++ATVK P + V+ AV+VR K RRKDG ++ F++NA VI+ KG+ I GP+ +E Sbjct: 11 ADNTGAKELLVIRVMG--GSTRRY--ANIGDVIVATVKDATPGGVVKKGDVVKAVVVRSVKGARRKDGSYIKFDENAAVIIKDDKTPKGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_EUBE2 (50S ribosomal protein L14 OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=rplN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + I V G G R A +GD+++ATVK+ P + V+ AV+VR K RRKDG ++ F++NA VI+ KG+ I GP+ +E D Sbjct: 11 ADNTGAKEILCIRVMG--GSTRRY--ANIGDVIVATVKEATPGGVVKKGDVVKAVVVRSVKGARRKDGSYIKFDENAAVIIKDDQTPKGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_ELUMP (50S ribosomal protein L14 OS=Elusimicrobium minutum (strain Pei191) GN=rplN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 40/111 (36.04%), Postives = 64/111 (57.66%), Query Frame = -3 Query: 236 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 559 + + + +N ADN+GA+ + V+G R A +GD++M +V+ P K V+ AV+VR + RRKDG ++ F++NA I+N GE KG+ + GPI +E D Sbjct: 2 IQLRSIINVADNSGARKVQCFKVRGGHHR----DIATLGDVIMCSVRDAIPTSSIKKGDVVRAVVVRVAREKRRKDGSYIRFDENAVCIINENGEPKGTRVFGPIARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_NICTO (50S ribosomal protein L14, chloroplastic OS=Nicotiana tomentosiformis GN=rpl14 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 38/106 (35.85%), Postives = 65/106 (61.32%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E +L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAIPNMPLERSEVVRAVIVRTCKELKRDNGIIIRYDDNAAVVIDQEGNPKGTRIFGAIARELREL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_NANDO (50S ribosomal protein L14, chloroplastic OS=Nandina domestica GN=rpl14 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 37/106 (34.91%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P + R +V+ AVIVR RK +R +G+ + ++DNA V+++ +G +G+ + G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPHMPLQRSEVIRAVIVRTRKELKRDNGMIIQYDDNAAVVIDQEGNPRGTRVFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_GUITH (50S ribosomal protein L14, chloroplastic OS=Guillardia theta GN=rpl14 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK + I + G + A +GD+++ VK P++ R V+ AVI+R + RRKDG+ + F+DNA VI+N + +G+ + GPI +E D Sbjct: 11 ADNSGAKKIMCIRILGGNRKY-----ASIGDVIIGVVKDATPNMPVKRSDVVRAVIMRTKNTIRRKDGMSIRFDDNAAVIINKENNPRGTRVFGPIARELRD 107 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |