CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_CUCSA (50S ribosomal protein L14, chloroplastic OS=Cucumis sativus GN=rpl14 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 39/106 (36.79%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +KK P+ R +V+ AVIVR K +R++G+ + ++DNA V+++ +G KG+ I G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_ANGEV (50S ribosomal protein L14, chloroplastic OS=Angiopteris evecta GN=rpl14 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 38/102 (37.25%), Postives = 63/102 (61.76%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GA+ L I V G R A GD+++A VK+ P++ + +V+ AV+VR K +R +G+ + F+DNA V++N +G +G+ + GPI +E Sbjct: 8 LNVADNSGARKLMCIRVLGTSDR----EYADTGDVIVAVVKEAVPNMPLKKSEVVRAVVVRTCKELKRDNGMRIRFDDNAAVVINQEGNPRGTRVFGPIARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_THELT (50S ribosomal protein L14 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK L +I V G + VGD+V+ +V+ P+ + +V+ AVIVR +KP RR DG ++ F+DNA V+++ E +G+ + GP+ +E Sbjct: 8 LNVADNSGAKKLRVIRVMGGFHK----KYGTVGDIVVCSVRDVVPNTGIKKGEVVKAVIVRTKKPVRRPDGTYIRFDDNAAVLIDKFNEPRGTRVFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PELPB (50S ribosomal protein L14 OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK + I V G GR A +GD ++ +VK P +K V AV+VR K RRKDG ++ F++NA V++N +GE +G+ I GP+ +E D Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----ASLGDQIIVSVKAAVPGGIVKKKDVCRAVVVRCVKESRRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_OCEIH (50S ribosomal protein L14 OS=Oceanobacillus iheyensis GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ + I V G GR +A +GD+++ TVK+ P + +V+ AVIVR + RRKDG ++ F++NA VI+ +G+ I GP+ +E D Sbjct: 11 ADNSGAREVLTIKVLGGSGR----KTANIGDVIVCTVKQATPGGVVKKGEVVKAVIVRSKSGARRKDGSYIRFDENAAVIIRDDKSPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_NOSP7 (50S ribosomal protein L14 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L I V G R +GD ++A VK P++ K V+ AVIVR RK R G+ + F+DNA VI+N G +G+ + GP+ +E D Sbjct: 8 LNVADNSGARKLMCIRVLGGGNRRYGF----IGDKIIAVVKDATPNMAVKKSDVVEAVIVRTRKAVSRDSGMSIRFDDNAAVIINKDGNPRGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_MYCSS (50S ribosomal protein L14 OS=Mycobacterium sp. (strain MCS) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G R A +GD+++ATVK+ P K V+ AV+VR K RR DG ++ F++NA VI+ + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----AGIGDVIVATVKEAIPGANVKRGDVVKAVVVRTVKERRRADGSYIKFDENAAVIIKNDNDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_MYCSK (50S ribosomal protein L14 OS=Mycobacterium sp. (strain KMS) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G R A +GD+++ATVK+ P K V+ AV+VR K RR DG ++ F++NA VI+ + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----AGIGDVIVATVKEAIPGANVKRGDVVKAVVVRTVKERRRADGSYIKFDENAAVIIKNDNDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_MYCSJ (50S ribosomal protein L14 OS=Mycobacterium sp. (strain JLS) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G R A +GD+++ATVK+ P K V+ AV+VR K RR DG ++ F++NA VI+ + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----AGIGDVIVATVKEAIPGANVKRGDVVKAVVVRTVKERRRADGSYIKFDENAAVIIKNDNDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_EXISA (50S ribosomal protein L14 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GA+ L I V G GR +A +GD+++ATVK+ P + V+ AV+VR ++ RRKDG ++ F++NA VI+ +G+ I GP+ +E Sbjct: 11 ADNSGARELLTIKVLGGSGR----KTANIGDIIVATVKQATPGGVVKKGDVVRAVVVRTKRGARRKDGSYIRFDENAAVIIKDDKSPRGTRIFGPVARE 105 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |