CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PROM9 (50S ribosomal protein L14 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK L I V G R A VGD+++ATVK P++ + +V+ AVIVR + RR G + F+DNA V++N KG+ + GP+ +E D Sbjct: 11 ADNSGAKRLQCIRVLGSNRRY-----AHVGDVIVATVKDALPNMGVKKSEVVKAVIVRTKATLRRNTGNSIRFDDNAAVLINEDKNPKGTRVFGPVARELRD 107
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PROM2 (50S ribosomal protein L14 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK L I V G R A VGD+++ATVK P++ + +V+ AVIVR + RR G + F+DNA V++N KG+ + GP+ +E D Sbjct: 11 ADNSGAKRLQCIRVLGSNRRY-----AHVGDVIVATVKDALPNMGVKKSEVVKAVIVRTKATLRRNTGNSIRFDDNAAVLINEDKNPKGTRVFGPVARELRD 107
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PROM0 (50S ribosomal protein L14 OS=Prochlorococcus marinus (strain MIT 9301) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GAK L I V G R A VGD+++ATVK P++ + +V+ AVIVR + RR G + F+DNA V++N KG+ + GP+ +E D Sbjct: 11 ADNSGAKRLQCIRVLGSNRRY-----AHVGDVIVATVKDALPNMGVKKSEVVKAVIVRTKATLRRNTGNSIRFDDNAAVLINEDKNPKGTRVFGPVARELRD 107
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PORGI (50S ribosomal protein L14 OS=Porphyromonas gingivalis GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK I V G G R S VGD+++ +VK P D++K V AVIVR +K RR DG ++ F+DNA V++N G+++GS I GP+ +E Sbjct: 11 ADNSGAKEALCIRVLG--GTRRRYAS--VGDIIVVSVKSVIPSSDIKKGAVSKAVIVRTKKEVRRPDGSYIRFDDNACVLLNAAGDIRGSRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PORG3 (50S ribosomal protein L14 OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK I V G G R S VGD+++ +VK P D++K V AVIVR +K RR DG ++ F+DNA V++N G+++GS I GP+ +E Sbjct: 11 ADNSGAKEALCIRVLG--GTRRRYAS--VGDIIVVSVKSVIPSSDIKKGAVSKAVIVRTKKEVRRPDGSYIRFDDNACVLLNAAGDIRGSRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_NOCFA (50S ribosomal protein L14 OS=Nocardia farcinica GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + I V G R A +GD+++ATVK P R V+ AV+VR K RR DG ++ F++NA V++ + +G+ I GP+G+E D Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----AGIGDVIVATVKDAIPGGNVKRGDVVKAVVVRTVKERRRPDGSYIKFDENAAVLIKADNDPRGTRIFGPVGRELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_NAUPA (50S ribosomal protein L14 OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK + I V G G R S VGD+++A+VKK P+ + K V+ AVIVR +K +R++G + F+DNA VI++ K E G+ I GPI +E Sbjct: 11 ADNSGAKEIMCIKVLG--GSKRRYAS--VGDIIVASVKKALPNGKIKKGQVVKAVIVRTKKEVQRENGSLIRFDDNAAVIIDAKKEPIGTRIFGPIARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_HYDS0 (50S ribosomal protein L14 OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + +I GI L + S VGD+V TVK+ P+ + KV AV+VR K +R DG ++ F+DNA +++N GE G+ I GPI +E Sbjct: 8 LNVADNSGAKKVQMI---GIPYALRQYVS--VGDVVTVTVKEATPNGAAKKGKVYRAVVVRVAKELKRSDGSYIKFDDNAVILLNQYGESLGTRILGPIARE 104
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_DESAA (50S ribosomal protein L14 OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK L I V G G R S VGD+++ +VK+ P+ + K VM AVIVR +K RR DG ++ F+DN+ V++N E G+ I GP+ +E Sbjct: 11 ADNSGAKVLGCIKVLG--GSKRRYAS--VGDIIVVSVKEAIPNSKVKKGDVMKAVIVRTKKEIRRPDGTYIRFDDNSAVLINATKEPIGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_OEDCA (50S ribosomal protein L14, chloroplastic OS=Oedogonium cardiacum GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 39/105 (37.14%), Postives = 65/105 (61.90%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L I V G + SA +G++++A VK P+ K ++ AVIVR +K +R++G+ + F+DNA V++N +G +G+ + GPI +E D Sbjct: 8 LNVADNSGARKLMCIRVLGGGNQ-----SANIGNIIIAVVKDAIPNTAFKKSDIVRAVIVRTKKGIKRENGMTIRFDDNAAVVINKEGNPRGTRVFGPIARELRD 107 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |