CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_DESHY (50S ribosomal protein L14 OS=Desulfitobacterium hafniense (strain Y51) GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = -3 Query: 236 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 559 + V + DN+GAK L I V G G + R S +GD+++A+VK+ P + V+ AV+VR +K +RKDG ++ F +NA V++ +G+ I GP+ +E D Sbjct: 2 IQVQTRLRVGDNSGAKELMCIKVLG--GSMRRYAS--IGDIIVASVKEATPGGVVKKGDVVKAVVVRTKKEIKRKDGTYIRFSENAAVVIKDDRSPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_DESHD (50S ribosomal protein L14 OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = -3 Query: 236 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 559 + V + DN+GAK L I V G G + R S +GD+++A+VK+ P + V+ AV+VR +K +RKDG ++ F +NA V++ +G+ I GP+ +E D Sbjct: 2 IQVQTRLRVGDNSGAKELMCIKVLG--GSMRRYAS--IGDIIVASVKEATPGGVVKKGDVVKAVVVRTKKEIKRKDGTYIRFSENAAVVIKDDRSPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CLOTE (50S ribosomal protein L14 OS=Clostridium tetani GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 236 TVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 544 T+ ADN+GA+ + I V G R A +GD+++A+VK P + +V+ AV+VR +K RR DG ++ F++NA VI+ + KG+ I GP+ +E D Sbjct: 7 TLKVADNSGARGIMCIKVLGGSNRRY----ANIGDIIVASVKSATPGGVVKKGEVVKAVVVRSKKGVRRADGSYIKFDENAAVIIKDDKQPKGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CAMLR (50S ribosomal protein L14 OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK L I V G G R A VGD+++A+VKK P+ + K V+ AVIVR +K R +G + F++NA VI++ K E G+ I GP+G+E Sbjct: 11 ADNSGAKELMCIKVLG--GSKRRY--ATVGDVIVASVKKALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDAKREPIGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_BIFAA (50S ribosomal protein L14 OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 ++ ADNTGAK L I V G G R A +GD+++A+VK P K V+ AV+VR K RR DG ++ F++NA VI+ E KG+ I GP+G+E D Sbjct: 8 LHVADNTGAKELLAIRVLG--GSKRRY--AGIGDVIVASVKDAIPGGSVKKGDVVKAVVVRTVKEHRRVDGSYIKFDENAAVILGSGREPKGTRIFGPVGRELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_BIFA0 (50S ribosomal protein L14 OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 ++ ADNTGAK L I V G G R A +GD+++A+VK P K V+ AV+VR K RR DG ++ F++NA VI+ E KG+ I GP+G+E D Sbjct: 8 LHVADNTGAKELLAIRVLG--GSKRRY--AGIGDVIVASVKDAIPGGSVKKGDVVKAVVVRTVKERRRADGSYIKFDENAAVILGSGREPKGTRIFGPVGRELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_PIPCE (50S ribosomal protein L14, chloroplastic OS=Piper cenocladum GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 37/106 (34.91%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ + G I +E L Sbjct: 8 LNVADNSGARELMCIRILGASNRRY----ANIGDIIVAVIKEAVPNMPLERSEVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_LEPTE (50S ribosomal protein L14, chloroplastic OS=Leptosira terrestris GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 38/102 (37.25%), Postives = 63/102 (61.76%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GA+ L I + G GR + +GD+++A VK P++ + +++ AVIVR RK R +G + F++NA VI+N +G +G+ I GP+ +E Sbjct: 8 LNVADNSGARKLMCIRILG--GRQKQYGK--IGDVIIAVVKDALPNMPLKKSEIVRAVIVRTRKGVNRNNGTSIRFDENAAVIINKEGNPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_DAUCA (50S ribosomal protein L14, chloroplastic OS=Daucus carota GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNMPLARSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_COFAR (50S ribosomal protein L14, chloroplastic OS=Coffea arabica GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQL 109 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |